Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 AC026271.3-201ENST00000571884 352 ntBASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 AC011298.2-201ENST00000617989 482 ntBASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB4Q9UN71 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 RPPH1-201ENST00000516869 333 ntBASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 AC073195.1-201ENST00000607241 877 ntBASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 FAM197Y4-202ENST00000622692 608 ntBASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGB4Q9UN71 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB4Q9UN71 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PCDHGB4Q9UN71 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGB4Q9UN71 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGB4Q9UN71 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGB4Q9UN71 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB4Q9UN71 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB4Q9UN71 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB4Q9UN71 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB4Q9UN71 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB4Q9UN71 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB4Q9UN71 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
PCDHGB4Q9UN71 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.71■□□□□ 0.43
PCDHGB4Q9UN71 RARRES2P10-201ENST00000564312 460 ntBASIC17.71■□□□□ 0.43
PCDHGB4Q9UN71 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGB4Q9UN71 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB4Q9UN71 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PCDHGB4Q9UN71 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
PCDHGB4Q9UN71 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
PCDHGB4Q9UN71 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB4Q9UN71 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB4Q9UN71 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB4Q9UN71 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB4Q9UN71 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB4Q9UN71 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PCDHGB4Q9UN71 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB4Q9UN71 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB4Q9UN71 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB4Q9UN71 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGB4Q9UN71 AC112777.1-201ENST00000540175 1423 ntBASIC17.71■□□□□ 0.43
PCDHGB4Q9UN71 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHGB4Q9UN71 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms