Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
EBF1Q9UH73 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
EBF1Q9UH73 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.58■□□□□ 0.56
EBF1Q9UH73 AC117500.6-201ENST00000624871 588 ntBASIC18.58■□□□□ 0.56
EBF1Q9UH73 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
EBF1Q9UH73 FP475955.4-201ENST00000623131 1990 ntBASIC18.58■□□□□ 0.56
EBF1Q9UH73 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
EBF1Q9UH73 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
EBF1Q9UH73 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
EBF1Q9UH73 NSUN5P1-202ENST00000421140 1535 ntBASIC18.58■□□□□ 0.56
EBF1Q9UH73 NSUN5P2-203ENST00000457352 1529 ntBASIC18.58■□□□□ 0.56
EBF1Q9UH73 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
EBF1Q9UH73 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
EBF1Q9UH73 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
EBF1Q9UH73 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
EBF1Q9UH73 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EBF1Q9UH73 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EBF1Q9UH73 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.57■□□□□ 0.56
EBF1Q9UH73 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EBF1Q9UH73 AC093484.2-201ENST00000580996 2166 ntBASIC18.57■□□□□ 0.56
EBF1Q9UH73 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
EBF1Q9UH73 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
EBF1Q9UH73 FZD10-202ENST00000539839 3282 ntBASIC18.57■□□□□ 0.56
EBF1Q9UH73 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
EBF1Q9UH73 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EBF1Q9UH73 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
EBF1Q9UH73 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.57■□□□□ 0.56
EBF1Q9UH73 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.57■□□□□ 0.56
EBF1Q9UH73 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.57■□□□□ 0.56
EBF1Q9UH73 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
EBF1Q9UH73 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.57■□□□□ 0.56
EBF1Q9UH73 AC009065.1-201ENST00000564055 1225 ntBASIC18.57■□□□□ 0.56
EBF1Q9UH73 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
EBF1Q9UH73 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.57■□□□□ 0.56
EBF1Q9UH73 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.57■□□□□ 0.56
EBF1Q9UH73 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
EBF1Q9UH73 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.57■□□□□ 0.56
EBF1Q9UH73 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
EBF1Q9UH73 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EBF1Q9UH73 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
EBF1Q9UH73 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EBF1Q9UH73 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.57■□□□□ 0.56
EBF1Q9UH73 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
EBF1Q9UH73 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
EBF1Q9UH73 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EBF1Q9UH73 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
EBF1Q9UH73 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EBF1Q9UH73 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.57■□□□□ 0.56
EBF1Q9UH73 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
EBF1Q9UH73 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EBF1Q9UH73 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
EBF1Q9UH73 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.56■□□□□ 0.56
EBF1Q9UH73 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EBF1Q9UH73 AC141586.3-201ENST00000562166 1838 ntBASIC18.56■□□□□ 0.56
EBF1Q9UH73 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
EBF1Q9UH73 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EBF1Q9UH73 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
EBF1Q9UH73 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
EBF1Q9UH73 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EBF1Q9UH73 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EBF1Q9UH73 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.56■□□□□ 0.56
EBF1Q9UH73 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.56■□□□□ 0.56
EBF1Q9UH73 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EBF1Q9UH73 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.56■□□□□ 0.56
EBF1Q9UH73 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.56■□□□□ 0.56
EBF1Q9UH73 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
EBF1Q9UH73 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
EBF1Q9UH73 AC120114.3-201ENST00000611923 658 ntBASIC18.56■□□□□ 0.56
EBF1Q9UH73 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
EBF1Q9UH73 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.56■□□□□ 0.56
EBF1Q9UH73 AC068587.9-201ENST00000641814 219 ntBASIC18.56■□□□□ 0.56
EBF1Q9UH73 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
EBF1Q9UH73 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.56■□□□□ 0.56
EBF1Q9UH73 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
EBF1Q9UH73 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
EBF1Q9UH73 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
EBF1Q9UH73 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
EBF1Q9UH73 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
EBF1Q9UH73 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.56■□□□□ 0.56
EBF1Q9UH73 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
EBF1Q9UH73 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.56■□□□□ 0.56
EBF1Q9UH73 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EBF1Q9UH73 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
EBF1Q9UH73 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
EBF1Q9UH73 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
EBF1Q9UH73 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EBF1Q9UH73 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
EBF1Q9UH73 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EBF1Q9UH73 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EBF1Q9UH73 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.55■□□□□ 0.56
EBF1Q9UH73 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
EBF1Q9UH73 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EBF1Q9UH73 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EBF1Q9UH73 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
EBF1Q9UH73 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
EBF1Q9UH73 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
EBF1Q9UH73 AP000593.1-201ENST00000393668 712 ntBASIC18.55■□□□□ 0.56
EBF1Q9UH73 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EBF1Q9UH73 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.55■□□□□ 0.56
EBF1Q9UH73 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms