Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CUEDC1Q9NWM3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.66■□□□□ 0.42
CUEDC1Q9NWM3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.66■□□□□ 0.42
CUEDC1Q9NWM3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CUEDC1Q9NWM3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CUEDC1Q9NWM3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CUEDC1Q9NWM3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.66■□□□□ 0.42
CUEDC1Q9NWM3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CUEDC1Q9NWM3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 DUSP5P1-201ENST00000441325 1139 ntBASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CUEDC1Q9NWM3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CUEDC1Q9NWM3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.64■□□□□ 0.42
CUEDC1Q9NWM3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CUEDC1Q9NWM3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.64■□□□□ 0.42
CUEDC1Q9NWM3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 PVRIG2P-201ENST00000435460 978 ntBASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 AL136038.4-201ENST00000603606 1261 ntBASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 HYMAI.1-201ENST00000620949 238 ntBASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 AL391807.1-203ENST00000604392 2365 ntBASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CUEDC1Q9NWM3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 AL024508.2-201ENST00000607749 1894 ntBASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 LINC01126-201ENST00000623515 1646 ntBASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms