Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.15■□□□□ 0.98
RBM28Q9NW13 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.15■□□□□ 0.98
RBM28Q9NW13 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RBM28Q9NW13 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.15■□□□□ 0.98
RBM28Q9NW13 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RBM28Q9NW13 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RBM28Q9NW13 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.15■□□□□ 0.98
RBM28Q9NW13 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.15■□□□□ 0.98
RBM28Q9NW13 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RBM28Q9NW13 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RBM28Q9NW13 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
RBM28Q9NW13 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RBM28Q9NW13 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RBM28Q9NW13 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
RBM28Q9NW13 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
RBM28Q9NW13 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RBM28Q9NW13 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
RBM28Q9NW13 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.14■□□□□ 0.98
RBM28Q9NW13 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RBM28Q9NW13 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RBM28Q9NW13 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RBM28Q9NW13 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RBM28Q9NW13 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.14■□□□□ 0.97
RBM28Q9NW13 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RBM28Q9NW13 AL645929.1-201ENST00000420084 975 ntBASIC21.14■□□□□ 0.97
RBM28Q9NW13 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RBM28Q9NW13 KRT18P35-201ENST00000510488 1269 ntBASIC21.14■□□□□ 0.97
RBM28Q9NW13 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.14■□□□□ 0.97
RBM28Q9NW13 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.14■□□□□ 0.97
RBM28Q9NW13 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.14■□□□□ 0.97
RBM28Q9NW13 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RBM28Q9NW13 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RBM28Q9NW13 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RBM28Q9NW13 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RBM28Q9NW13 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
RBM28Q9NW13 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
RBM28Q9NW13 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RBM28Q9NW13 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RBM28Q9NW13 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.13■□□□□ 0.97
RBM28Q9NW13 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RBM28Q9NW13 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.13■□□□□ 0.97
RBM28Q9NW13 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RBM28Q9NW13 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RBM28Q9NW13 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RBM28Q9NW13 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RBM28Q9NW13 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RBM28Q9NW13 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RBM28Q9NW13 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RBM28Q9NW13 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RBM28Q9NW13 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
RBM28Q9NW13 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RBM28Q9NW13 IGHGP-201ENST00000390555 1178 ntBASIC21.13■□□□□ 0.97
RBM28Q9NW13 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RBM28Q9NW13 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RBM28Q9NW13 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RBM28Q9NW13 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.13■□□□□ 0.97
RBM28Q9NW13 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.13■□□□□ 0.97
RBM28Q9NW13 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
RBM28Q9NW13 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RBM28Q9NW13 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.13■□□□□ 0.97
RBM28Q9NW13 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RBM28Q9NW13 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RBM28Q9NW13 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RBM28Q9NW13 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.13■□□□□ 0.97
RBM28Q9NW13 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
RBM28Q9NW13 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
RBM28Q9NW13 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.12■□□□□ 0.97
RBM28Q9NW13 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RBM28Q9NW13 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RBM28Q9NW13 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.12■□□□□ 0.97
RBM28Q9NW13 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RBM28Q9NW13 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.12■□□□□ 0.97
RBM28Q9NW13 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
RBM28Q9NW13 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RBM28Q9NW13 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RBM28Q9NW13 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RBM28Q9NW13 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RBM28Q9NW13 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RBM28Q9NW13 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.12■□□□□ 0.97
RBM28Q9NW13 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.12■□□□□ 0.97
RBM28Q9NW13 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.12■□□□□ 0.97
RBM28Q9NW13 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RBM28Q9NW13 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.12■□□□□ 0.97
RBM28Q9NW13 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
RBM28Q9NW13 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
RBM28Q9NW13 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
RBM28Q9NW13 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.12■□□□□ 0.97
RBM28Q9NW13 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RBM28Q9NW13 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.11■□□□□ 0.97
RBM28Q9NW13 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RBM28Q9NW13 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RBM28Q9NW13 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RBM28Q9NW13 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.11■□□□□ 0.97
RBM28Q9NW13 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.11■□□□□ 0.97
RBM28Q9NW13 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RBM28Q9NW13 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.11■□□□□ 0.97
RBM28Q9NW13 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RBM28Q9NW13 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RBM28Q9NW13 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.11■□□□□ 0.97
RBM28Q9NW13 FAM86EP-206ENST00000510506 987 ntBASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms