Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.87■□□□□ 0.61
HPS4Q9NQG7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.87■□□□□ 0.61
HPS4Q9NQG7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HPS4Q9NQG7 AC004408.2-201ENST00000623613 2777 ntBASIC18.87■□□□□ 0.61
HPS4Q9NQG7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.87■□□□□ 0.61
HPS4Q9NQG7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
HPS4Q9NQG7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HPS4Q9NQG7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
HPS4Q9NQG7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HPS4Q9NQG7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HPS4Q9NQG7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HPS4Q9NQG7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HPS4Q9NQG7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HPS4Q9NQG7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HPS4Q9NQG7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.86■□□□□ 0.61
HPS4Q9NQG7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HPS4Q9NQG7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HPS4Q9NQG7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.86■□□□□ 0.61
HPS4Q9NQG7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HPS4Q9NQG7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HPS4Q9NQG7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HPS4Q9NQG7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
HPS4Q9NQG7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HPS4Q9NQG7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.86■□□□□ 0.61
HPS4Q9NQG7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HPS4Q9NQG7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.86■□□□□ 0.61
HPS4Q9NQG7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HPS4Q9NQG7 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.86■□□□□ 0.61
HPS4Q9NQG7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.86■□□□□ 0.61
HPS4Q9NQG7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HPS4Q9NQG7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HPS4Q9NQG7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HPS4Q9NQG7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HPS4Q9NQG7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.86■□□□□ 0.61
HPS4Q9NQG7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.86■□□□□ 0.61
HPS4Q9NQG7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HPS4Q9NQG7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HPS4Q9NQG7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HPS4Q9NQG7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.86■□□□□ 0.61
HPS4Q9NQG7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.86■□□□□ 0.61
HPS4Q9NQG7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.85■□□□□ 0.61
HPS4Q9NQG7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HPS4Q9NQG7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HPS4Q9NQG7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.85■□□□□ 0.61
HPS4Q9NQG7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HPS4Q9NQG7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HPS4Q9NQG7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HPS4Q9NQG7 AP000593.1-201ENST00000393668 712 ntBASIC18.85■□□□□ 0.61
HPS4Q9NQG7 MRPL3P1-201ENST00000400109 1033 ntBASIC18.85■□□□□ 0.61
HPS4Q9NQG7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.85■□□□□ 0.61
HPS4Q9NQG7 VENTXP7-201ENST00000475503 772 ntBASIC18.85■□□□□ 0.61
HPS4Q9NQG7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HPS4Q9NQG7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.85■□□□□ 0.61
HPS4Q9NQG7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.85■□□□□ 0.61
HPS4Q9NQG7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HPS4Q9NQG7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HPS4Q9NQG7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HPS4Q9NQG7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HPS4Q9NQG7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
HPS4Q9NQG7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HPS4Q9NQG7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HPS4Q9NQG7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.85■□□□□ 0.61
HPS4Q9NQG7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.85■□□□□ 0.61
HPS4Q9NQG7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
HPS4Q9NQG7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.85■□□□□ 0.61
HPS4Q9NQG7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HPS4Q9NQG7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HPS4Q9NQG7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.84■□□□□ 0.61
HPS4Q9NQG7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HPS4Q9NQG7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HPS4Q9NQG7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
HPS4Q9NQG7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
HPS4Q9NQG7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
HPS4Q9NQG7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HPS4Q9NQG7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HPS4Q9NQG7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HPS4Q9NQG7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HPS4Q9NQG7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HPS4Q9NQG7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HPS4Q9NQG7 NUS1P2-201ENST00000417358 873 ntBASIC18.84■□□□□ 0.61
HPS4Q9NQG7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
HPS4Q9NQG7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.84■□□□□ 0.61
HPS4Q9NQG7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.84■□□□□ 0.61
HPS4Q9NQG7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.84■□□□□ 0.61
HPS4Q9NQG7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HPS4Q9NQG7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HPS4Q9NQG7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
HPS4Q9NQG7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HPS4Q9NQG7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
HPS4Q9NQG7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HPS4Q9NQG7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HPS4Q9NQG7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HPS4Q9NQG7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HPS4Q9NQG7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.84■□□□□ 0.61
HPS4Q9NQG7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HPS4Q9NQG7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
HPS4Q9NQG7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.83■□□□□ 0.61
HPS4Q9NQG7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
HPS4Q9NQG7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HPS4Q9NQG7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms