Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTN4Q9NQC3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTN4Q9NQC3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.54■■□□□ 1.04
RTN4Q9NQC3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RTN4Q9NQC3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTN4Q9NQC3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.54■■□□□ 1.04
RTN4Q9NQC3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTN4Q9NQC3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.54■■□□□ 1.04
RTN4Q9NQC3 DBET-201ENST00000630918 3363 ntBASIC21.54■■□□□ 1.04
RTN4Q9NQC3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RTN4Q9NQC3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTN4Q9NQC3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTN4Q9NQC3 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.54■■□□□ 1.04
RTN4Q9NQC3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTN4Q9NQC3 AC069236.1-201ENST00000604339 616 ntBASIC21.54■■□□□ 1.04
RTN4Q9NQC3 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
RTN4Q9NQC3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC21.54■■□□□ 1.04
RTN4Q9NQC3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTN4Q9NQC3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC21.54■■□□□ 1.04
RTN4Q9NQC3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC21.54■■□□□ 1.04
RTN4Q9NQC3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTN4Q9NQC3 AC079328.2-201ENST00000561241 3354 ntBASIC21.54■■□□□ 1.04
RTN4Q9NQC3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTN4Q9NQC3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
RTN4Q9NQC3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTN4Q9NQC3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC21.54■■□□□ 1.04
RTN4Q9NQC3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTN4Q9NQC3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTN4Q9NQC3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
RTN4Q9NQC3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTN4Q9NQC3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTN4Q9NQC3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTN4Q9NQC3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTN4Q9NQC3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTN4Q9NQC3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RTN4Q9NQC3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTN4Q9NQC3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RTN4Q9NQC3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTN4Q9NQC3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTN4Q9NQC3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RTN4Q9NQC3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.53■■□□□ 1.04
RTN4Q9NQC3 AC016769.1-201ENST00000409132 1010 ntBASIC21.53■■□□□ 1.04
RTN4Q9NQC3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.53■■□□□ 1.04
RTN4Q9NQC3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.53■■□□□ 1.04
RTN4Q9NQC3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
RTN4Q9NQC3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
RTN4Q9NQC3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RTN4Q9NQC3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTN4Q9NQC3 AC010980.2-201ENST00000587099 1412 ntBASIC21.53■■□□□ 1.04
RTN4Q9NQC3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.53■■□□□ 1.04
RTN4Q9NQC3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RTN4Q9NQC3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC21.53■■□□□ 1.04
RTN4Q9NQC3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC21.53■■□□□ 1.04
RTN4Q9NQC3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTN4Q9NQC3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.52■■□□□ 1.04
RTN4Q9NQC3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTN4Q9NQC3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC21.52■■□□□ 1.03
RTN4Q9NQC3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
RTN4Q9NQC3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
RTN4Q9NQC3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
RTN4Q9NQC3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
RTN4Q9NQC3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
RTN4Q9NQC3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms