Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.14
C12orf4Q9NQ89 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 AC073592.3-201ENST00000625118 1834 ntBASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 FLJ38576-201ENST00000623820 2459 ntBASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
C12orf4Q9NQ89 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 GXYLT1P5-201ENST00000614548 1189 ntBASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.88■□□□□ 0.13
C12orf4Q9NQ89 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
C12orf4Q9NQ89 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
C12orf4Q9NQ89 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
C12orf4Q9NQ89 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
C12orf4Q9NQ89 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.87■□□□□ 0.13
C12orf4Q9NQ89 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
C12orf4Q9NQ89 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
C12orf4Q9NQ89 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.87■□□□□ 0.13
C12orf4Q9NQ89 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
C12orf4Q9NQ89 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.87■□□□□ 0.13
C12orf4Q9NQ89 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.87■□□□□ 0.13
C12orf4Q9NQ89 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
C12orf4Q9NQ89 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.87■□□□□ 0.13
C12orf4Q9NQ89 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.87■□□□□ 0.13
C12orf4Q9NQ89 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.87■□□□□ 0.13
C12orf4Q9NQ89 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms