Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SIX2Q9NPC8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.58■□□□□ 0.73
SIX2Q9NPC8 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
SIX2Q9NPC8 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
SIX2Q9NPC8 KRT18P55-202ENST00000578578 1546 ntBASIC19.58■□□□□ 0.73
SIX2Q9NPC8 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SIX2Q9NPC8 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SIX2Q9NPC8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SIX2Q9NPC8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.58■□□□□ 0.72
SIX2Q9NPC8 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.58■□□□□ 0.72
SIX2Q9NPC8 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.58■□□□□ 0.72
SIX2Q9NPC8 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
SIX2Q9NPC8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.58■□□□□ 0.72
SIX2Q9NPC8 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.58■□□□□ 0.72
SIX2Q9NPC8 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.58■□□□□ 0.72
SIX2Q9NPC8 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.58■□□□□ 0.72
SIX2Q9NPC8 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.58■□□□□ 0.72
SIX2Q9NPC8 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
SIX2Q9NPC8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SIX2Q9NPC8 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SIX2Q9NPC8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SIX2Q9NPC8 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SIX2Q9NPC8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SIX2Q9NPC8 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SIX2Q9NPC8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SIX2Q9NPC8 AC012317.2-201ENST00000623305 2251 ntBASIC19.58■□□□□ 0.72
SIX2Q9NPC8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.58■□□□□ 0.72
SIX2Q9NPC8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SIX2Q9NPC8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SIX2Q9NPC8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SIX2Q9NPC8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SIX2Q9NPC8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIX2Q9NPC8 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
SIX2Q9NPC8 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIX2Q9NPC8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIX2Q9NPC8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
SIX2Q9NPC8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SIX2Q9NPC8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIX2Q9NPC8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIX2Q9NPC8 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SIX2Q9NPC8 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SIX2Q9NPC8 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SIX2Q9NPC8 AC097493.4-201ENST00000641197 219 ntBASIC19.57■□□□□ 0.72
SIX2Q9NPC8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIX2Q9NPC8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIX2Q9NPC8 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SIX2Q9NPC8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.57■□□□□ 0.72
SIX2Q9NPC8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIX2Q9NPC8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
SIX2Q9NPC8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIX2Q9NPC8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIX2Q9NPC8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIX2Q9NPC8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIX2Q9NPC8 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIX2Q9NPC8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
SIX2Q9NPC8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIX2Q9NPC8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SIX2Q9NPC8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIX2Q9NPC8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIX2Q9NPC8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SIX2Q9NPC8 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SIX2Q9NPC8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SIX2Q9NPC8 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SIX2Q9NPC8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIX2Q9NPC8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIX2Q9NPC8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.56■□□□□ 0.72
SIX2Q9NPC8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SIX2Q9NPC8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIX2Q9NPC8 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIX2Q9NPC8 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SIX2Q9NPC8 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIX2Q9NPC8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.56■□□□□ 0.72
SIX2Q9NPC8 AP000523.1-201ENST00000398242 1049 ntBASIC19.56■□□□□ 0.72
SIX2Q9NPC8 DUTP2-201ENST00000519164 463 ntBASIC19.56■□□□□ 0.72
SIX2Q9NPC8 AL441883.1-201ENST00000566170 1045 ntBASIC19.56■□□□□ 0.72
SIX2Q9NPC8 AC079602.3-201ENST00000623931 403 ntBASIC19.56■□□□□ 0.72
SIX2Q9NPC8 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIX2Q9NPC8 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SIX2Q9NPC8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIX2Q9NPC8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIX2Q9NPC8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SIX2Q9NPC8 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SIX2Q9NPC8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SIX2Q9NPC8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.56■□□□□ 0.72
SIX2Q9NPC8 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.56■□□□□ 0.72
SIX2Q9NPC8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SIX2Q9NPC8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SIX2Q9NPC8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SIX2Q9NPC8 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SIX2Q9NPC8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SIX2Q9NPC8 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SIX2Q9NPC8 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.55■□□□□ 0.72
SIX2Q9NPC8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SIX2Q9NPC8 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.55■□□□□ 0.72
SIX2Q9NPC8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SIX2Q9NPC8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SIX2Q9NPC8 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SIX2Q9NPC8 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SIX2Q9NPC8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SIX2Q9NPC8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms