Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC12.15□□□□□ -0.46
LITAFQ99732 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC12.15□□□□□ -0.46
LITAFQ99732 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
LITAFQ99732 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LITAFQ99732 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LITAFQ99732 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
LITAFQ99732 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC12.15□□□□□ -0.46
LITAFQ99732 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
LITAFQ99732 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
LITAFQ99732 AC008406.3-201ENST00000620001 1374 ntBASIC12.15□□□□□ -0.46
LITAFQ99732 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
LITAFQ99732 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
LITAFQ99732 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
LITAFQ99732 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
LITAFQ99732 CA12-203ENST00000422263 2556 ntTSL 2 BASIC12.15□□□□□ -0.47
LITAFQ99732 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC12.15□□□□□ -0.47
LITAFQ99732 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC12.15□□□□□ -0.47
LITAFQ99732 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC12.15□□□□□ -0.47
LITAFQ99732 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC12.15□□□□□ -0.47
LITAFQ99732 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LITAFQ99732 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
LITAFQ99732 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LITAFQ99732 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LITAFQ99732 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC12.14□□□□□ -0.47
LITAFQ99732 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LITAFQ99732 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LITAFQ99732 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC12.14□□□□□ -0.47
LITAFQ99732 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
LITAFQ99732 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
LITAFQ99732 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
LITAFQ99732 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LITAFQ99732 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LITAFQ99732 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LITAFQ99732 MFF-205ENST00000354503 1085 ntTSL 2 BASIC12.14□□□□□ -0.47
LITAFQ99732 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LITAFQ99732 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC12.14□□□□□ -0.47
LITAFQ99732 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LITAFQ99732 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LITAFQ99732 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC12.14□□□□□ -0.47
LITAFQ99732 ISCU-212ENST00000547005 795 ntTSL 3 BASIC12.14□□□□□ -0.47
LITAFQ99732 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LITAFQ99732 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC12.14□□□□□ -0.47
LITAFQ99732 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC12.14□□□□□ -0.47
LITAFQ99732 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
LITAFQ99732 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC12.14□□□□□ -0.47
LITAFQ99732 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC12.14□□□□□ -0.47
LITAFQ99732 RCC2P3-201ENST00000418112 1537 ntBASIC12.14□□□□□ -0.47
LITAFQ99732 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC12.14□□□□□ -0.47
LITAFQ99732 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LITAFQ99732 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LITAFQ99732 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LITAFQ99732 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LITAFQ99732 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LITAFQ99732 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LITAFQ99732 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12.14□□□□□ -0.47
LITAFQ99732 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LITAFQ99732 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LITAFQ99732 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
LITAFQ99732 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LITAFQ99732 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LITAFQ99732 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
LITAFQ99732 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
LITAFQ99732 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LITAFQ99732 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LITAFQ99732 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC12.13□□□□□ -0.47
LITAFQ99732 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LITAFQ99732 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LITAFQ99732 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
LITAFQ99732 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
LITAFQ99732 AGK-211ENST00000629555 2765 ntTSL 5 BASIC12.13□□□□□ -0.47
LITAFQ99732 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC12.13□□□□□ -0.47
LITAFQ99732 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LITAFQ99732 AL356309.3-201ENST00000624132 1934 ntBASIC12.13□□□□□ -0.47
LITAFQ99732 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
LITAFQ99732 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LITAFQ99732 AC103702.1-201ENST00000548801 2630 ntBASIC12.13□□□□□ -0.47
LITAFQ99732 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LITAFQ99732 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
LITAFQ99732 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LITAFQ99732 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LITAFQ99732 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LITAFQ99732 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LITAFQ99732 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
LITAFQ99732 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
LITAFQ99732 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC12.13□□□□□ -0.47
LITAFQ99732 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC12.13□□□□□ -0.47
LITAFQ99732 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LITAFQ99732 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LITAFQ99732 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LITAFQ99732 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LITAFQ99732 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LITAFQ99732 TREX2-204ENST00000370212 861 ntTSL 5 BASIC12.13□□□□□ -0.47
LITAFQ99732 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LITAFQ99732 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
LITAFQ99732 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LITAFQ99732 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC12.13□□□□□ -0.47
LITAFQ99732 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC12.13□□□□□ -0.47
LITAFQ99732 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC12.13□□□□□ -0.47
LITAFQ99732 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC12.13□□□□□ -0.47
LITAFQ99732 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms