Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.85■□□□□ 0.61
NECTIN4Q96NY8 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NECTIN4Q96NY8 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
NECTIN4Q96NY8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NECTIN4Q96NY8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.84■□□□□ 0.61
NECTIN4Q96NY8 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
NECTIN4Q96NY8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NECTIN4Q96NY8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
NECTIN4Q96NY8 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NECTIN4Q96NY8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.84■□□□□ 0.61
NECTIN4Q96NY8 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.84■□□□□ 0.61
NECTIN4Q96NY8 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.84■□□□□ 0.61
NECTIN4Q96NY8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NECTIN4Q96NY8 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.84■□□□□ 0.61
NECTIN4Q96NY8 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NECTIN4Q96NY8 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NECTIN4Q96NY8 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.84■□□□□ 0.61
NECTIN4Q96NY8 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
NECTIN4Q96NY8 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
NECTIN4Q96NY8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.84■□□□□ 0.61
NECTIN4Q96NY8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.84■□□□□ 0.61
NECTIN4Q96NY8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.84■□□□□ 0.61
NECTIN4Q96NY8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NECTIN4Q96NY8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NECTIN4Q96NY8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NECTIN4Q96NY8 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.84■□□□□ 0.61
NECTIN4Q96NY8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.84■□□□□ 0.61
NECTIN4Q96NY8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
NECTIN4Q96NY8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.84■□□□□ 0.61
NECTIN4Q96NY8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NECTIN4Q96NY8 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.84■□□□□ 0.61
NECTIN4Q96NY8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NECTIN4Q96NY8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
NECTIN4Q96NY8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NECTIN4Q96NY8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
NECTIN4Q96NY8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.83■□□□□ 0.61
NECTIN4Q96NY8 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NECTIN4Q96NY8 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.83■□□□□ 0.61
NECTIN4Q96NY8 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NECTIN4Q96NY8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NECTIN4Q96NY8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NECTIN4Q96NY8 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NECTIN4Q96NY8 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NECTIN4Q96NY8 LAGE3P1-201ENST00000425356 484 ntBASIC18.83■□□□□ 0.6
NECTIN4Q96NY8 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NECTIN4Q96NY8 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.83■□□□□ 0.6
NECTIN4Q96NY8 UNC93B6-202ENST00000528242 690 ntBASIC18.83■□□□□ 0.6
NECTIN4Q96NY8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.83■□□□□ 0.6
NECTIN4Q96NY8 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NECTIN4Q96NY8 MTDHP4-201ENST00000600287 670 ntBASIC18.83■□□□□ 0.6
NECTIN4Q96NY8 LINC02084-201ENST00000606069 1096 ntBASIC18.83■□□□□ 0.6
NECTIN4Q96NY8 AC134684.3-201ENST00000641758 218 ntBASIC18.83■□□□□ 0.6
NECTIN4Q96NY8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
NECTIN4Q96NY8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NECTIN4Q96NY8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
NECTIN4Q96NY8 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NECTIN4Q96NY8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NECTIN4Q96NY8 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.83■□□□□ 0.6
NECTIN4Q96NY8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
NECTIN4Q96NY8 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NECTIN4Q96NY8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NECTIN4Q96NY8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NECTIN4Q96NY8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NECTIN4Q96NY8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NECTIN4Q96NY8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NECTIN4Q96NY8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.82■□□□□ 0.6
NECTIN4Q96NY8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NECTIN4Q96NY8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NECTIN4Q96NY8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NECTIN4Q96NY8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NECTIN4Q96NY8 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NECTIN4Q96NY8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NECTIN4Q96NY8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NECTIN4Q96NY8 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.82■□□□□ 0.6
NECTIN4Q96NY8 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.82■□□□□ 0.6
NECTIN4Q96NY8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.82■□□□□ 0.6
NECTIN4Q96NY8 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.82■□□□□ 0.6
NECTIN4Q96NY8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.82■□□□□ 0.6
NECTIN4Q96NY8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.82■□□□□ 0.6
NECTIN4Q96NY8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NECTIN4Q96NY8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NECTIN4Q96NY8 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NECTIN4Q96NY8 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NECTIN4Q96NY8 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NECTIN4Q96NY8 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
NECTIN4Q96NY8 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.82■□□□□ 0.6
NECTIN4Q96NY8 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.82■□□□□ 0.6
NECTIN4Q96NY8 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NECTIN4Q96NY8 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NECTIN4Q96NY8 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NECTIN4Q96NY8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms