Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 KRT18P56-201ENST00000507275 550 ntBASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 AC124864.1-201ENST00000623408 392 ntBASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCD1Q96GM5 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SMARCD1Q96GM5 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SMARCD1Q96GM5 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.66
SMARCD1Q96GM5 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SMARCD1Q96GM5 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
SMARCD1Q96GM5 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SMARCD1Q96GM5 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
SMARCD1Q96GM5 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.14■□□□□ 0.65
SMARCD1Q96GM5 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCD1Q96GM5 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.14■□□□□ 0.65
SMARCD1Q96GM5 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.14■□□□□ 0.65
SMARCD1Q96GM5 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.14■□□□□ 0.65
SMARCD1Q96GM5 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.14■□□□□ 0.65
SMARCD1Q96GM5 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SMARCD1Q96GM5 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.14■□□□□ 0.65
SMARCD1Q96GM5 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCD1Q96GM5 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.14■□□□□ 0.65
SMARCD1Q96GM5 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.14■□□□□ 0.65
SMARCD1Q96GM5 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.14■□□□□ 0.65
SMARCD1Q96GM5 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.14■□□□□ 0.65
SMARCD1Q96GM5 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.14■□□□□ 0.65
SMARCD1Q96GM5 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.14■□□□□ 0.65
SMARCD1Q96GM5 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
SMARCD1Q96GM5 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.14■□□□□ 0.65
SMARCD1Q96GM5 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCD1Q96GM5 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCD1Q96GM5 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCD1Q96GM5 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCD1Q96GM5 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCD1Q96GM5 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCD1Q96GM5 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCD1Q96GM5 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCD1Q96GM5 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCD1Q96GM5 PHGDH-209ENST00000641074 1780 ntBASIC19.14■□□□□ 0.65
SMARCD1Q96GM5 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCD1Q96GM5 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCD1Q96GM5 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCD1Q96GM5 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SMARCD1Q96GM5 AC090164.3-201ENST00000610780 2143 ntBASIC19.13■□□□□ 0.65
SMARCD1Q96GM5 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCD1Q96GM5 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
SMARCD1Q96GM5 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.13■□□□□ 0.65
SMARCD1Q96GM5 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.13■□□□□ 0.65
SMARCD1Q96GM5 LINC00265-3P-201ENST00000447588 903 ntBASIC19.13■□□□□ 0.65
SMARCD1Q96GM5 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.13■□□□□ 0.65
SMARCD1Q96GM5 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.13■□□□□ 0.65
SMARCD1Q96GM5 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.13■□□□□ 0.65
SMARCD1Q96GM5 AC009154.2-201ENST00000621177 724 ntBASIC19.13■□□□□ 0.65
SMARCD1Q96GM5 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCD1Q96GM5 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCD1Q96GM5 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SMARCD1Q96GM5 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.13■□□□□ 0.65
SMARCD1Q96GM5 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.13■□□□□ 0.65
SMARCD1Q96GM5 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.13■□□□□ 0.65
SMARCD1Q96GM5 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCD1Q96GM5 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCD1Q96GM5 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.13■□□□□ 0.65
SMARCD1Q96GM5 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SMARCD1Q96GM5 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SMARCD1Q96GM5 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCD1Q96GM5 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SMARCD1Q96GM5 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
SMARCD1Q96GM5 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCD1Q96GM5 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCD1Q96GM5 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.12■□□□□ 0.65
SMARCD1Q96GM5 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms