Protein–RNA interactions for Protein: Q969L4

LSM10, U7 snRNA-associated Sm-like protein LSm10, humanhuman

Known RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10Q969L4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LSM10Q969L4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
LSM10Q969L4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LSM10Q969L4 PKD1P1-201ENST00000458669 6805 ntBASIC14.9□□□□□ -0.02
LSM10Q969L4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LSM10Q969L4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LSM10Q969L4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LSM10Q969L4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LSM10Q969L4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.9□□□□□ -0.02
LSM10Q969L4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LSM10Q969L4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.9□□□□□ -0.02
LSM10Q969L4 AC073195.1-201ENST00000607241 877 ntBASIC14.9□□□□□ -0.02
LSM10Q969L4 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.9□□□□□ -0.02
LSM10Q969L4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LSM10Q969L4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LSM10Q969L4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LSM10Q969L4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.9□□□□□ -0.02
LSM10Q969L4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LSM10Q969L4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
LSM10Q969L4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LSM10Q969L4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.9□□□□□ -0.02
LSM10Q969L4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.9□□□□□ -0.02
LSM10Q969L4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.9□□□□□ -0.02
LSM10Q969L4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.9□□□□□ -0.02
LSM10Q969L4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.9□□□□□ -0.02
LSM10Q969L4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LSM10Q969L4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LSM10Q969L4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LSM10Q969L4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LSM10Q969L4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LSM10Q969L4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LSM10Q969L4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.89□□□□□ -0.03
LSM10Q969L4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LSM10Q969L4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LSM10Q969L4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.89□□□□□ -0.03
LSM10Q969L4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LSM10Q969L4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LSM10Q969L4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LSM10Q969L4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LSM10Q969L4 FAM207BP-201ENST00000447172 505 ntBASIC14.89□□□□□ -0.03
LSM10Q969L4 RPPH1-201ENST00000516869 333 ntBASIC14.89□□□□□ -0.03
LSM10Q969L4 AF186192.3-201ENST00000583427 947 ntBASIC14.89□□□□□ -0.03
LSM10Q969L4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.89□□□□□ -0.03
LSM10Q969L4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LSM10Q969L4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LSM10Q969L4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LSM10Q969L4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LSM10Q969L4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LSM10Q969L4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.89□□□□□ -0.03
LSM10Q969L4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.89□□□□□ -0.03
LSM10Q969L4 KRT8P50-201ENST00000562022 1438 ntBASIC14.89□□□□□ -0.03
LSM10Q969L4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LSM10Q969L4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LSM10Q969L4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LSM10Q969L4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
LSM10Q969L4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LSM10Q969L4 AC009053.2-201ENST00000563701 2365 ntBASIC14.89□□□□□ -0.03
LSM10Q969L4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.89□□□□□ -0.03
LSM10Q969L4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.89□□□□□ -0.03
LSM10Q969L4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LSM10Q969L4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.89□□□□□ -0.03
LSM10Q969L4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LSM10Q969L4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.89□□□□□ -0.03
LSM10Q969L4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.89□□□□□ -0.03
LSM10Q969L4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.88□□□□□ -0.03
LSM10Q969L4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSM10Q969L4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
LSM10Q969L4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSM10Q969L4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSM10Q969L4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSM10Q969L4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.88□□□□□ -0.03
LSM10Q969L4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LSM10Q969L4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSM10Q969L4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSM10Q969L4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
LSM10Q969L4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.88□□□□□ -0.03
LSM10Q969L4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LSM10Q969L4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LSM10Q969L4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
LSM10Q969L4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.88□□□□□ -0.03
LSM10Q969L4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.88□□□□□ -0.03
LSM10Q969L4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.88□□□□□ -0.03
LSM10Q969L4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.88□□□□□ -0.03
LSM10Q969L4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.88□□□□□ -0.03
LSM10Q969L4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.88□□□□□ -0.03
LSM10Q969L4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LSM10Q969L4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LSM10Q969L4 FAM197Y4-202ENST00000622692 608 ntBASIC14.88□□□□□ -0.03
LSM10Q969L4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.88□□□□□ -0.03
LSM10Q969L4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LSM10Q969L4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LSM10Q969L4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSM10Q969L4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSM10Q969L4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSM10Q969L4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LSM10Q969L4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.88□□□□□ -0.03
LSM10Q969L4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.88□□□□□ -0.03
LSM10Q969L4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LSM10Q969L4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LSM10Q969L4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms