Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SMARCE1Q969G3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCE1Q969G3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCE1Q969G3 FLJ13224-201ENST00000313737 1514 ntBASIC20.58■□□□□ 0.89
SMARCE1Q969G3 AC134043.2-201ENST00000624206 2238 ntBASIC20.58■□□□□ 0.89
SMARCE1Q969G3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.58■□□□□ 0.89
SMARCE1Q969G3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCE1Q969G3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCE1Q969G3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SMARCE1Q969G3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCE1Q969G3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCE1Q969G3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCE1Q969G3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.58■□□□□ 0.89
SMARCE1Q969G3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.58■□□□□ 0.89
SMARCE1Q969G3 AC026471.5-201ENST00000615068 467 ntBASIC20.58■□□□□ 0.89
SMARCE1Q969G3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
SMARCE1Q969G3 PHGDH-209ENST00000641074 1780 ntBASIC20.58■□□□□ 0.89
SMARCE1Q969G3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.58■□□□□ 0.88
SMARCE1Q969G3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.58■□□□□ 0.88
SMARCE1Q969G3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMARCE1Q969G3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SMARCE1Q969G3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMARCE1Q969G3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.58■□□□□ 0.88
SMARCE1Q969G3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.58■□□□□ 0.88
SMARCE1Q969G3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMARCE1Q969G3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCE1Q969G3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SMARCE1Q969G3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SMARCE1Q969G3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCE1Q969G3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCE1Q969G3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCE1Q969G3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCE1Q969G3 GNAS-203ENST00000306120 1878 ntBASIC20.57■□□□□ 0.88
SMARCE1Q969G3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCE1Q969G3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.57■□□□□ 0.88
SMARCE1Q969G3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.57■□□□□ 0.88
SMARCE1Q969G3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.57■□□□□ 0.88
SMARCE1Q969G3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCE1Q969G3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC20.57■□□□□ 0.88
SMARCE1Q969G3 AP005242.2-201ENST00000580065 1175 ntBASIC20.57■□□□□ 0.88
SMARCE1Q969G3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCE1Q969G3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SMARCE1Q969G3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.57■□□□□ 0.88
SMARCE1Q969G3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.57■□□□□ 0.88
SMARCE1Q969G3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCE1Q969G3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC20.57■□□□□ 0.88
SMARCE1Q969G3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.57■□□□□ 0.88
SMARCE1Q969G3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SMARCE1Q969G3 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.57■□□□□ 0.88
SMARCE1Q969G3 AL163051.1-201ENST00000569214 1512 ntBASIC20.57■□□□□ 0.88
SMARCE1Q969G3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.57■□□□□ 0.88
SMARCE1Q969G3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCE1Q969G3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCE1Q969G3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCE1Q969G3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
SMARCE1Q969G3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCE1Q969G3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCE1Q969G3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.56■□□□□ 0.88
SMARCE1Q969G3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.56■□□□□ 0.88
SMARCE1Q969G3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCE1Q969G3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCE1Q969G3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCE1Q969G3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCE1Q969G3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCE1Q969G3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCE1Q969G3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCE1Q969G3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.56■□□□□ 0.88
SMARCE1Q969G3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
SMARCE1Q969G3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.56■□□□□ 0.88
SMARCE1Q969G3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCE1Q969G3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SMARCE1Q969G3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCE1Q969G3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.56■□□□□ 0.88
SMARCE1Q969G3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCE1Q969G3 SDHAP2-201ENST00000455183 2001 ntBASIC20.56■□□□□ 0.88
SMARCE1Q969G3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCE1Q969G3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.56■□□□□ 0.88
SMARCE1Q969G3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.56■□□□□ 0.88
SMARCE1Q969G3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.56■□□□□ 0.88
SMARCE1Q969G3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCE1Q969G3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCE1Q969G3 AC009102.3-201ENST00000623118 1491 ntBASIC20.56■□□□□ 0.88
SMARCE1Q969G3 AC139713.2-201ENST00000641328 2723 ntBASIC20.55■□□□□ 0.88
SMARCE1Q969G3 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.55■□□□□ 0.88
SMARCE1Q969G3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SMARCE1Q969G3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCE1Q969G3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCE1Q969G3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCE1Q969G3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCE1Q969G3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCE1Q969G3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCE1Q969G3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SMARCE1Q969G3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCE1Q969G3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.55■□□□□ 0.88
SMARCE1Q969G3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCE1Q969G3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.55■□□□□ 0.88
SMARCE1Q969G3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCE1Q969G3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SMARCE1Q969G3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCE1Q969G3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms