Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 RN7SL204P-201ENST00000582831 262 ntBASIC15.82■□□□□ 0.12
USP9XQ93008 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.82■□□□□ 0.12
USP9XQ93008 MIR6799-201ENST00000620297 69 ntBASIC15.82■□□□□ 0.12
USP9XQ93008 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP9XQ93008 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP9XQ93008 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP9XQ93008 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP9XQ93008 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.82■□□□□ 0.12
USP9XQ93008 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP9XQ93008 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.82■□□□□ 0.12
USP9XQ93008 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP9XQ93008 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
USP9XQ93008 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP9XQ93008 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
USP9XQ93008 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP9XQ93008 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP9XQ93008 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP9XQ93008 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
USP9XQ93008 AC006504.4-201ENST00000592118 1568 ntBASIC15.81■□□□□ 0.12
USP9XQ93008 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.81■□□□□ 0.12
USP9XQ93008 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
USP9XQ93008 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
USP9XQ93008 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
USP9XQ93008 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC15.81■□□□□ 0.12
USP9XQ93008 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP9XQ93008 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
USP9XQ93008 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
USP9XQ93008 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP9XQ93008 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.81■□□□□ 0.12
USP9XQ93008 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
USP9XQ93008 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
USP9XQ93008 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP9XQ93008 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.81■□□□□ 0.12
USP9XQ93008 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.81■□□□□ 0.12
USP9XQ93008 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
USP9XQ93008 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.81■□□□□ 0.12
USP9XQ93008 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
USP9XQ93008 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.81■□□□□ 0.12
USP9XQ93008 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP9XQ93008 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP9XQ93008 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.81■□□□□ 0.12
USP9XQ93008 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
USP9XQ93008 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
USP9XQ93008 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.81■□□□□ 0.12
USP9XQ93008 AC093214.1-201ENST00000511688 1107 ntBASIC15.81■□□□□ 0.12
USP9XQ93008 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.81■□□□□ 0.12
USP9XQ93008 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.8■□□□□ 0.12
USP9XQ93008 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
USP9XQ93008 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
USP9XQ93008 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
USP9XQ93008 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
USP9XQ93008 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
USP9XQ93008 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
USP9XQ93008 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
USP9XQ93008 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
USP9XQ93008 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
USP9XQ93008 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.8■□□□□ 0.12
USP9XQ93008 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.8■□□□□ 0.12
USP9XQ93008 AC002472.2-201ENST00000442739 958 ntBASIC15.8■□□□□ 0.12
USP9XQ93008 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
USP9XQ93008 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.8■□□□□ 0.12
USP9XQ93008 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
USP9XQ93008 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.8■□□□□ 0.12
USP9XQ93008 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.8■□□□□ 0.12
USP9XQ93008 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.8■□□□□ 0.12
USP9XQ93008 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.8■□□□□ 0.12
USP9XQ93008 AC092902.6-201ENST00000641783 218 ntBASIC15.8■□□□□ 0.12
USP9XQ93008 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
USP9XQ93008 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
USP9XQ93008 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.8■□□□□ 0.12
USP9XQ93008 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
USP9XQ93008 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
USP9XQ93008 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
USP9XQ93008 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
USP9XQ93008 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.8■□□□□ 0.12
USP9XQ93008 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.8■□□□□ 0.12
USP9XQ93008 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.8■□□□□ 0.12
USP9XQ93008 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
USP9XQ93008 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
USP9XQ93008 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
USP9XQ93008 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
USP9XQ93008 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.79■□□□□ 0.12
USP9XQ93008 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
USP9XQ93008 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
USP9XQ93008 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
USP9XQ93008 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.79■□□□□ 0.12
USP9XQ93008 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.79■□□□□ 0.12
USP9XQ93008 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.79■□□□□ 0.12
USP9XQ93008 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.79■□□□□ 0.12
USP9XQ93008 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
USP9XQ93008 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.79■□□□□ 0.12
USP9XQ93008 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
USP9XQ93008 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.79■□□□□ 0.12
USP9XQ93008 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
USP9XQ93008 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
USP9XQ93008 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
USP9XQ93008 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
USP9XQ93008 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
USP9XQ93008 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
USP9XQ93008 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms