Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
SMARCC1Q92922 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SMARCC1Q92922 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SMARCC1Q92922 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC23.26■■□□□ 1.31
SMARCC1Q92922 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
SMARCC1Q92922 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SMARCC1Q92922 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC23.25■■□□□ 1.31
SMARCC1Q92922 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SMARCC1Q92922 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
SMARCC1Q92922 AL158211.5-201ENST00000623583 2518 ntBASIC23.25■■□□□ 1.31
SMARCC1Q92922 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC23.25■■□□□ 1.31
SMARCC1Q92922 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SMARCC1Q92922 SNCG-201ENST00000348795 684 ntTSL 2 BASIC23.25■■□□□ 1.31
SMARCC1Q92922 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC23.25■■□□□ 1.31
SMARCC1Q92922 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC23.25■■□□□ 1.31
SMARCC1Q92922 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC23.25■■□□□ 1.31
SMARCC1Q92922 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC23.25■■□□□ 1.31
SMARCC1Q92922 RNF151-202ENST00000569210 853 ntTSL 2 BASIC23.25■■□□□ 1.31
SMARCC1Q92922 AC002347.1-201ENST00000569543 541 ntBASIC23.25■■□□□ 1.31
SMARCC1Q92922 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC23.25■■□□□ 1.31
SMARCC1Q92922 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
SMARCC1Q92922 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SMARCC1Q92922 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC23.25■■□□□ 1.31
SMARCC1Q92922 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SMARCC1Q92922 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMARCC1Q92922 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SMARCC1Q92922 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SMARCC1Q92922 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC23.24■■□□□ 1.31
SMARCC1Q92922 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
SMARCC1Q92922 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC23.24■■□□□ 1.31
SMARCC1Q92922 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMARCC1Q92922 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
SMARCC1Q92922 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SMARCC1Q92922 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC23.24■■□□□ 1.31
SMARCC1Q92922 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SMARCC1Q92922 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC23.24■■□□□ 1.31
SMARCC1Q92922 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC23.24■■□□□ 1.31
SMARCC1Q92922 AC027796.2-201ENST00000575326 344 ntBASIC23.24■■□□□ 1.31
SMARCC1Q92922 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC23.24■■□□□ 1.31
SMARCC1Q92922 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC23.24■■□□□ 1.31
SMARCC1Q92922 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC23.24■■□□□ 1.31
SMARCC1Q92922 AC134684.3-201ENST00000641758 218 ntBASIC23.24■■□□□ 1.31
SMARCC1Q92922 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMARCC1Q92922 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SMARCC1Q92922 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC23.24■■□□□ 1.31
SMARCC1Q92922 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMARCC1Q92922 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SMARCC1Q92922 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC23.24■■□□□ 1.31
SMARCC1Q92922 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMARCC1Q92922 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMARCC1Q92922 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SMARCC1Q92922 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
SMARCC1Q92922 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC23.24■■□□□ 1.31
SMARCC1Q92922 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC23.24■■□□□ 1.31
SMARCC1Q92922 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMARCC1Q92922 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC23.23■■□□□ 1.31
SMARCC1Q92922 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC23.23■■□□□ 1.31
SMARCC1Q92922 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMARCC1Q92922 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.23■■□□□ 1.31
SMARCC1Q92922 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC23.23■■□□□ 1.31
SMARCC1Q92922 AC099343.3-201ENST00000605834 2503 ntBASIC23.23■■□□□ 1.31
SMARCC1Q92922 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC23.23■■□□□ 1.31
SMARCC1Q92922 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMARCC1Q92922 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMARCC1Q92922 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
SMARCC1Q92922 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SMARCC1Q92922 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMARCC1Q92922 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMARCC1Q92922 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC23.23■■□□□ 1.31
SMARCC1Q92922 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMARCC1Q92922 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
SMARCC1Q92922 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMARCC1Q92922 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC23.23■■□□□ 1.31
SMARCC1Q92922 CRCP-205ENST00000431089 942 ntTSL 2 BASIC23.23■■□□□ 1.31
SMARCC1Q92922 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC23.23■■□□□ 1.31
SMARCC1Q92922 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC23.23■■□□□ 1.31
SMARCC1Q92922 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC23.23■■□□□ 1.31
SMARCC1Q92922 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC23.23■■□□□ 1.31
SMARCC1Q92922 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC23.23■■□□□ 1.31
SMARCC1Q92922 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMARCC1Q92922 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SMARCC1Q92922 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
SMARCC1Q92922 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMARCC1Q92922 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMARCC1Q92922 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC23.23■■□□□ 1.31
SMARCC1Q92922 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMARCC1Q92922 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMARCC1Q92922 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMARCC1Q92922 SNAI3-AS1-205ENST00000568633 2096 ntBASIC23.23■■□□□ 1.31
SMARCC1Q92922 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMARCC1Q92922 LINC01126-201ENST00000623515 1646 ntBASIC23.22■■□□□ 1.31
SMARCC1Q92922 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMARCC1Q92922 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC23.22■■□□□ 1.31
SMARCC1Q92922 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC23.22■■□□□ 1.31
SMARCC1Q92922 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMARCC1Q92922 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMARCC1Q92922 BEX3-201ENST00000361298 921 ntTSL 2 BASIC23.22■■□□□ 1.31
SMARCC1Q92922 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMARCC1Q92922 COA5-202ENST00000409997 557 ntTSL 4 BASIC23.22■■□□□ 1.31
SMARCC1Q92922 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms