Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC22.43■■□□□ 1.18
RPGRQ92834 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
RPGRQ92834 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC22.43■■□□□ 1.18
RPGRQ92834 AL356309.3-201ENST00000624132 1934 ntBASIC22.43■■□□□ 1.18
RPGRQ92834 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
RPGRQ92834 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC22.42■■□□□ 1.18
RPGRQ92834 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
RPGRQ92834 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RPGRQ92834 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RPGRQ92834 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
RPGRQ92834 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC22.42■■□□□ 1.18
RPGRQ92834 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
RPGRQ92834 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RPGRQ92834 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RPGRQ92834 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
RPGRQ92834 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC22.42■■□□□ 1.18
RPGRQ92834 KRT18P65-201ENST00000439811 1286 ntBASIC22.42■■□□□ 1.18
RPGRQ92834 AC092183.1-201ENST00000469884 875 ntBASIC22.42■■□□□ 1.18
RPGRQ92834 AC092910.1-201ENST00000482027 1129 ntBASIC22.42■■□□□ 1.18
RPGRQ92834 OR7E14P-202ENST00000530490 1290 ntBASIC22.42■■□□□ 1.18
RPGRQ92834 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC22.42■■□□□ 1.18
RPGRQ92834 PNMT-203ENST00000581428 677 ntTSL 2 BASIC22.42■■□□□ 1.18
RPGRQ92834 AC027601.4-201ENST00000611259 610 ntBASIC22.42■■□□□ 1.18
RPGRQ92834 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC22.42■■□□□ 1.18
RPGRQ92834 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RPGRQ92834 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC22.42■■□□□ 1.18
RPGRQ92834 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RPGRQ92834 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
RPGRQ92834 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RPGRQ92834 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RPGRQ92834 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RPGRQ92834 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
RPGRQ92834 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RPGRQ92834 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RPGRQ92834 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC22.41■■□□□ 1.18
RPGRQ92834 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC22.41■■□□□ 1.18
RPGRQ92834 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RPGRQ92834 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RPGRQ92834 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
RPGRQ92834 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
RPGRQ92834 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RPGRQ92834 FAM220CP-201ENST00000395253 831 ntBASIC22.41■■□□□ 1.18
RPGRQ92834 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC22.41■■□□□ 1.18
RPGRQ92834 RAB17-203ENST00000409576 466 ntTSL 3 BASIC22.41■■□□□ 1.18
RPGRQ92834 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC22.41■■□□□ 1.18
RPGRQ92834 CD63-204ENST00000546939 779 ntTSL 3 BASIC22.41■■□□□ 1.18
RPGRQ92834 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RPGRQ92834 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
RPGRQ92834 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC22.41■■□□□ 1.18
RPGRQ92834 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
RPGRQ92834 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC22.41■■□□□ 1.18
RPGRQ92834 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RPGRQ92834 LINC01126-201ENST00000623515 1646 ntBASIC22.41■■□□□ 1.18
RPGRQ92834 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RPGRQ92834 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RPGRQ92834 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RPGRQ92834 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC22.41■■□□□ 1.18
RPGRQ92834 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
RPGRQ92834 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
RPGRQ92834 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
RPGRQ92834 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RPGRQ92834 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RPGRQ92834 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
RPGRQ92834 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC22.4■■□□□ 1.18
RPGRQ92834 AC098831.1-202ENST00000438821 336 ntBASIC22.4■■□□□ 1.18
RPGRQ92834 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RPGRQ92834 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC22.4■■□□□ 1.18
RPGRQ92834 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC22.4■■□□□ 1.18
RPGRQ92834 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC22.4■■□□□ 1.18
RPGRQ92834 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RPGRQ92834 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC22.39■■□□□ 1.18
RPGRQ92834 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.18
RPGRQ92834 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.39■■□□□ 1.18
RPGRQ92834 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
RPGRQ92834 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
RPGRQ92834 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
RPGRQ92834 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
RPGRQ92834 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC22.39■■□□□ 1.18
RPGRQ92834 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
RPGRQ92834 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.18
RPGRQ92834 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
RPGRQ92834 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
RPGRQ92834 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC22.39■■□□□ 1.17
RPGRQ92834 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
RPGRQ92834 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RPGRQ92834 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RPGRQ92834 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RPGRQ92834 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RPGRQ92834 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
RPGRQ92834 MED15P5-201ENST00000423150 992 ntBASIC22.39■■□□□ 1.17
RPGRQ92834 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC22.39■■□□□ 1.17
RPGRQ92834 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC22.39■■□□□ 1.17
RPGRQ92834 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC22.39■■□□□ 1.17
RPGRQ92834 AC140113.2-201ENST00000604370 208 ntBASIC22.39■■□□□ 1.17
RPGRQ92834 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC22.39■■□□□ 1.17
RPGRQ92834 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
RPGRQ92834 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RPGRQ92834 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RPGRQ92834 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RPGRQ92834 AL499627.1-201ENST00000569373 2188 ntBASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms