Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.92■□□□□ 0.46
HMGCLL1Q8TB92 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCLL1Q8TB92 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
HMGCLL1Q8TB92 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
HMGCLL1Q8TB92 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
HMGCLL1Q8TB92 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCLL1Q8TB92 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCLL1Q8TB92 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCLL1Q8TB92 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCLL1Q8TB92 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 MYLKP1-201ENST00000509077 1580 ntBASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 AC009065.1-201ENST00000564055 1225 ntBASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 MIR3917-201ENST00000580971 93 ntBASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 AC010240.3-201ENST00000607688 395 ntBASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 AC138028.4-201ENST00000564984 1845 ntBASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HMGCLL1Q8TB92 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCLL1Q8TB92 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.9■□□□□ 0.46
HMGCLL1Q8TB92 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCLL1Q8TB92 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCLL1Q8TB92 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HMGCLL1Q8TB92 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCLL1Q8TB92 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.9■□□□□ 0.46
HMGCLL1Q8TB92 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCLL1Q8TB92 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCLL1Q8TB92 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCLL1Q8TB92 STARP1-201ENST00000397973 869 ntBASIC17.9■□□□□ 0.46
HMGCLL1Q8TB92 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
HMGCLL1Q8TB92 HOMER2P1-201ENST00000455653 964 ntBASIC17.9■□□□□ 0.46
HMGCLL1Q8TB92 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.9■□□□□ 0.46
HMGCLL1Q8TB92 DUX4L26-201ENST00000489078 1255 ntBASIC17.9■□□□□ 0.46
HMGCLL1Q8TB92 AC063952.2-201ENST00000498792 1227 ntBASIC17.9■□□□□ 0.46
HMGCLL1Q8TB92 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
HMGCLL1Q8TB92 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCLL1Q8TB92 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.9■□□□□ 0.46
HMGCLL1Q8TB92 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
HMGCLL1Q8TB92 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCLL1Q8TB92 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.9■□□□□ 0.46
HMGCLL1Q8TB92 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.9■□□□□ 0.46
HMGCLL1Q8TB92 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCLL1Q8TB92 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.9■□□□□ 0.46
HMGCLL1Q8TB92 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.9■□□□□ 0.46
HMGCLL1Q8TB92 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
HMGCLL1Q8TB92 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HMGCLL1Q8TB92 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCLL1Q8TB92 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCLL1Q8TB92 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCLL1Q8TB92 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCLL1Q8TB92 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.89■□□□□ 0.45
HMGCLL1Q8TB92 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
HMGCLL1Q8TB92 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCLL1Q8TB92 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCLL1Q8TB92 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCLL1Q8TB92 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCLL1Q8TB92 GNAS-203ENST00000306120 1878 ntBASIC17.89■□□□□ 0.45
HMGCLL1Q8TB92 FAM8A6P-201ENST00000407496 1135 ntBASIC17.89■□□□□ 0.45
HMGCLL1Q8TB92 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.89■□□□□ 0.45
HMGCLL1Q8TB92 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.89■□□□□ 0.45
HMGCLL1Q8TB92 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.89■□□□□ 0.45
HMGCLL1Q8TB92 AC034232.1-201ENST00000506026 1064 ntBASIC17.89■□□□□ 0.45
HMGCLL1Q8TB92 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
HMGCLL1Q8TB92 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCLL1Q8TB92 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCLL1Q8TB92 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.89■□□□□ 0.45
HMGCLL1Q8TB92 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCLL1Q8TB92 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCLL1Q8TB92 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
HMGCLL1Q8TB92 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCLL1Q8TB92 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms