Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIML2Q8N7C3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIML2Q8N7C3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIML2Q8N7C3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRIML2Q8N7C3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIML2Q8N7C3 AC112777.1-201ENST00000540175 1423 ntBASIC17.67■□□□□ 0.42
TRIML2Q8N7C3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIML2Q8N7C3 AC091390.4-202ENST00000476426 537 ntBASIC17.67■□□□□ 0.42
TRIML2Q8N7C3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.67■□□□□ 0.42
TRIML2Q8N7C3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIML2Q8N7C3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.67■□□□□ 0.42
TRIML2Q8N7C3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRIML2Q8N7C3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIML2Q8N7C3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIML2Q8N7C3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIML2Q8N7C3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIML2Q8N7C3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.67■□□□□ 0.42
TRIML2Q8N7C3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIML2Q8N7C3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIML2Q8N7C3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRIML2Q8N7C3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIML2Q8N7C3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.67■□□□□ 0.42
TRIML2Q8N7C3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
TRIML2Q8N7C3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRIML2Q8N7C3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIML2Q8N7C3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIML2Q8N7C3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRIML2Q8N7C3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIML2Q8N7C3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIML2Q8N7C3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIML2Q8N7C3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 AC134043.2-201ENST00000624206 2238 ntBASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 RPS2P4-201ENST00000476944 856 ntBASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 C1QBPP2-201ENST00000528754 825 ntBASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIML2Q8N7C3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TRIML2Q8N7C3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIML2Q8N7C3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIML2Q8N7C3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIML2Q8N7C3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIML2Q8N7C3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIML2Q8N7C3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIML2Q8N7C3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIML2Q8N7C3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIML2Q8N7C3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIML2Q8N7C3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIML2Q8N7C3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIML2Q8N7C3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIML2Q8N7C3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIML2Q8N7C3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.65■□□□□ 0.42
TRIML2Q8N7C3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIML2Q8N7C3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIML2Q8N7C3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIML2Q8N7C3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.65■□□□□ 0.42
TRIML2Q8N7C3 AC011298.2-201ENST00000617989 482 ntBASIC17.65■□□□□ 0.42
TRIML2Q8N7C3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIML2Q8N7C3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIML2Q8N7C3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIML2Q8N7C3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIML2Q8N7C3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
TRIML2Q8N7C3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIML2Q8N7C3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIML2Q8N7C3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIML2Q8N7C3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms