Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPOQ8N3V7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.51■□□□□ 0.55
SYNPOQ8N3V7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.51■□□□□ 0.55
SYNPOQ8N3V7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.51■□□□□ 0.55
SYNPOQ8N3V7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPOQ8N3V7 AC148477.8-201ENST00000624298 468 ntBASIC18.51■□□□□ 0.55
SYNPOQ8N3V7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPOQ8N3V7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPOQ8N3V7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.51■□□□□ 0.55
SYNPOQ8N3V7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPOQ8N3V7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPOQ8N3V7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPOQ8N3V7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPOQ8N3V7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.51■□□□□ 0.55
SYNPOQ8N3V7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SYNPOQ8N3V7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPOQ8N3V7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPOQ8N3V7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SYNPOQ8N3V7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SYNPOQ8N3V7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYNPOQ8N3V7 PMS2P7-201ENST00000506558 1336 ntBASIC18.5■□□□□ 0.55
SYNPOQ8N3V7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYNPOQ8N3V7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.5■□□□□ 0.55
SYNPOQ8N3V7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SYNPOQ8N3V7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYNPOQ8N3V7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYNPOQ8N3V7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SYNPOQ8N3V7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYNPOQ8N3V7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYNPOQ8N3V7 AL032819.2-201ENST00000624543 2162 ntBASIC18.5■□□□□ 0.55
SYNPOQ8N3V7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SYNPOQ8N3V7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYNPOQ8N3V7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.5■□□□□ 0.55
SYNPOQ8N3V7 AC009533.2-201ENST00000543664 586 ntBASIC18.5■□□□□ 0.55
SYNPOQ8N3V7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.5■□□□□ 0.55
SYNPOQ8N3V7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.5■□□□□ 0.55
SYNPOQ8N3V7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.5■□□□□ 0.55
SYNPOQ8N3V7 ZNF259P1-201ENST00000407656 1365 ntBASIC18.5■□□□□ 0.55
SYNPOQ8N3V7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.5■□□□□ 0.55
SYNPOQ8N3V7 AC004408.2-201ENST00000623613 2777 ntBASIC18.5■□□□□ 0.55
SYNPOQ8N3V7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.5■□□□□ 0.55
SYNPOQ8N3V7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SYNPOQ8N3V7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 AC112777.1-201ENST00000540175 1423 ntBASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 TP73-AS1-210ENST00000637775 1455 ntBASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SYNPOQ8N3V7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 AC243591.1-201ENST00000452967 1364 ntBASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 RCN1P2-201ENST00000398357 915 ntBASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 FGFR3P6-201ENST00000457012 610 ntBASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 RPL13AP23-201ENST00000480739 586 ntBASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 TERC-201ENST00000602385 541 ntBASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms