Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM42Q8IWZ5 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 AC008403.3-201ENST00000598924 454 ntBASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM42Q8IWZ5 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM42Q8IWZ5 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TRIM42Q8IWZ5 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
TRIM42Q8IWZ5 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
TRIM42Q8IWZ5 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 AC131212.4-201ENST00000623606 975 ntBASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms