Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00346Q8IVM7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 AC138028.4-201ENST00000564984 1845 ntBASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 WWOX-216ENST00000569818 525 ntBASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 PHGDH-209ENST00000641074 1780 ntBASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 HOXB1-202ENST00000577092 1414 ntBASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00346Q8IVM7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 TSPY14P-201ENST00000303979 915 ntBASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 MIR149-201ENST00000384879 89 ntBASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC00346Q8IVM7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00346Q8IVM7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00346Q8IVM7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00346Q8IVM7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00346Q8IVM7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.15■□□□□ 0.18
LINC00346Q8IVM7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00346Q8IVM7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00346Q8IVM7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00346Q8IVM7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.15■□□□□ 0.18
LINC00346Q8IVM7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00346Q8IVM7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00346Q8IVM7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00346Q8IVM7 AC112497.1-201ENST00000624824 639 ntBASIC16.15■□□□□ 0.18
LINC00346Q8IVM7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.15■□□□□ 0.18
LINC00346Q8IVM7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00346Q8IVM7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00346Q8IVM7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00346Q8IVM7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00346Q8IVM7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.15■□□□□ 0.18
LINC00346Q8IVM7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00346Q8IVM7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00346Q8IVM7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00346Q8IVM7 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms