Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 TSPY21P-201ENST00000433481 731 ntBASIC15.19■□□□□ 0.02
ZNF546Q86UE3 CNN2P6-201ENST00000439038 900 ntBASIC15.19■□□□□ 0.02
ZNF546Q86UE3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.19■□□□□ 0.02
ZNF546Q86UE3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
ZNF546Q86UE3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.18■□□□□ 0.02
ZNF546Q86UE3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 AL596257.1-201ENST00000641463 2694 ntBASIC15.17■□□□□ 0.02
ZNF546Q86UE3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 RCC2P6-201ENST00000526625 1557 ntBASIC15.17■□□□□ 0.02
ZNF546Q86UE3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 AL355472.2-201ENST00000422958 438 ntBASIC15.17■□□□□ 0.02
ZNF546Q86UE3 AC034268.1-201ENST00000441047 882 ntBASIC15.17■□□□□ 0.02
ZNF546Q86UE3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF546Q86UE3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms