Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.69■□□□□ 0.58
DENND4AQ7Z401 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DENND4AQ7Z401 AC073621.1-201ENST00000392730 636 ntBASIC18.69■□□□□ 0.58
DENND4AQ7Z401 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
DENND4AQ7Z401 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.69■□□□□ 0.58
DENND4AQ7Z401 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
DENND4AQ7Z401 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
DENND4AQ7Z401 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.69■□□□□ 0.58
DENND4AQ7Z401 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DENND4AQ7Z401 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.69■□□□□ 0.58
DENND4AQ7Z401 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DENND4AQ7Z401 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
DENND4AQ7Z401 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
DENND4AQ7Z401 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DENND4AQ7Z401 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.68■□□□□ 0.58
DENND4AQ7Z401 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
DENND4AQ7Z401 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DENND4AQ7Z401 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DENND4AQ7Z401 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DENND4AQ7Z401 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
DENND4AQ7Z401 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.68■□□□□ 0.58
DENND4AQ7Z401 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
DENND4AQ7Z401 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DENND4AQ7Z401 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DENND4AQ7Z401 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.68■□□□□ 0.58
DENND4AQ7Z401 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DENND4AQ7Z401 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
DENND4AQ7Z401 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DENND4AQ7Z401 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.68■□□□□ 0.58
DENND4AQ7Z401 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
DENND4AQ7Z401 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.68■□□□□ 0.58
DENND4AQ7Z401 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.67■□□□□ 0.58
DENND4AQ7Z401 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DENND4AQ7Z401 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DENND4AQ7Z401 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DENND4AQ7Z401 AC007967.3-201ENST00000434308 558 ntBASIC18.67■□□□□ 0.58
DENND4AQ7Z401 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.67■□□□□ 0.58
DENND4AQ7Z401 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
DENND4AQ7Z401 AC083906.6-201ENST00000641366 219 ntBASIC18.67■□□□□ 0.58
DENND4AQ7Z401 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DENND4AQ7Z401 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DENND4AQ7Z401 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DENND4AQ7Z401 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DENND4AQ7Z401 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
DENND4AQ7Z401 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DENND4AQ7Z401 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DENND4AQ7Z401 AL049812.1-201ENST00000432563 2267 ntBASIC18.67■□□□□ 0.58
DENND4AQ7Z401 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DENND4AQ7Z401 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DENND4AQ7Z401 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
DENND4AQ7Z401 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.67■□□□□ 0.58
DENND4AQ7Z401 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.67■□□□□ 0.58
DENND4AQ7Z401 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.67■□□□□ 0.58
DENND4AQ7Z401 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.67■□□□□ 0.58
DENND4AQ7Z401 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DENND4AQ7Z401 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DENND4AQ7Z401 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.66■□□□□ 0.58
DENND4AQ7Z401 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DENND4AQ7Z401 LINC01126-201ENST00000623515 1646 ntBASIC18.66■□□□□ 0.58
DENND4AQ7Z401 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.66■□□□□ 0.58
DENND4AQ7Z401 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DENND4AQ7Z401 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.66■□□□□ 0.58
DENND4AQ7Z401 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
DENND4AQ7Z401 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DENND4AQ7Z401 AC023274.1-201ENST00000418278 595 ntBASIC18.66■□□□□ 0.58
DENND4AQ7Z401 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.66■□□□□ 0.58
DENND4AQ7Z401 AC108751.1-201ENST00000490852 363 ntBASIC18.66■□□□□ 0.58
DENND4AQ7Z401 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.66■□□□□ 0.58
DENND4AQ7Z401 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.66■□□□□ 0.58
DENND4AQ7Z401 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.66■□□□□ 0.58
DENND4AQ7Z401 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
DENND4AQ7Z401 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DENND4AQ7Z401 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DENND4AQ7Z401 AC099343.3-201ENST00000605834 2503 ntBASIC18.66■□□□□ 0.58
DENND4AQ7Z401 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DENND4AQ7Z401 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DENND4AQ7Z401 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
DENND4AQ7Z401 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
DENND4AQ7Z401 AC007952.6-201ENST00000573168 2673 ntBASIC18.66■□□□□ 0.58
DENND4AQ7Z401 AC003957.1-201ENST00000625108 2673 ntBASIC18.66■□□□□ 0.58
DENND4AQ7Z401 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
DENND4AQ7Z401 MYLKP1-201ENST00000509077 1580 ntBASIC18.66■□□□□ 0.58
DENND4AQ7Z401 SIGLEC16-201ENST00000599858 1437 ntBASIC18.65■□□□□ 0.58
DENND4AQ7Z401 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
DENND4AQ7Z401 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DENND4AQ7Z401 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
DENND4AQ7Z401 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.65■□□□□ 0.58
DENND4AQ7Z401 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DENND4AQ7Z401 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DENND4AQ7Z401 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.65■□□□□ 0.58
DENND4AQ7Z401 AC112482.1-201ENST00000492080 688 ntBASIC18.65■□□□□ 0.58
DENND4AQ7Z401 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.65■□□□□ 0.58
DENND4AQ7Z401 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.65■□□□□ 0.58
DENND4AQ7Z401 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DENND4AQ7Z401 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
DENND4AQ7Z401 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DENND4AQ7Z401 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
DENND4AQ7Z401 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DENND4AQ7Z401 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
DENND4AQ7Z401 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms