Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.34■□□□□ 0.53
LYSMD3Q7Z3D4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD3Q7Z3D4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.34■□□□□ 0.53
LYSMD3Q7Z3D4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.34■□□□□ 0.53
LYSMD3Q7Z3D4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.34■□□□□ 0.53
LYSMD3Q7Z3D4 AC083849.1-201ENST00000615227 514 ntBASIC18.34■□□□□ 0.53
LYSMD3Q7Z3D4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.34■□□□□ 0.53
LYSMD3Q7Z3D4 AL024508.2-201ENST00000607749 1894 ntBASIC18.34■□□□□ 0.53
LYSMD3Q7Z3D4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD3Q7Z3D4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD3Q7Z3D4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD3Q7Z3D4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD3Q7Z3D4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD3Q7Z3D4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
LYSMD3Q7Z3D4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.34■□□□□ 0.53
LYSMD3Q7Z3D4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.33■□□□□ 0.53
LYSMD3Q7Z3D4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LYSMD3Q7Z3D4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LYSMD3Q7Z3D4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.33■□□□□ 0.53
LYSMD3Q7Z3D4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LYSMD3Q7Z3D4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LYSMD3Q7Z3D4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.33■□□□□ 0.53
LYSMD3Q7Z3D4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
LYSMD3Q7Z3D4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.33■□□□□ 0.53
LYSMD3Q7Z3D4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LYSMD3Q7Z3D4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
LYSMD3Q7Z3D4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
LYSMD3Q7Z3D4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LYSMD3Q7Z3D4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LYSMD3Q7Z3D4 HLA-F-220ENST00000434407 884 ntBASIC18.33■□□□□ 0.52
LYSMD3Q7Z3D4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.33■□□□□ 0.52
LYSMD3Q7Z3D4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.33■□□□□ 0.52
LYSMD3Q7Z3D4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
LYSMD3Q7Z3D4 LINC01126-201ENST00000623515 1646 ntBASIC18.33■□□□□ 0.52
LYSMD3Q7Z3D4 GMCL1P1-201ENST00000463439 1581 ntBASIC18.33■□□□□ 0.52
LYSMD3Q7Z3D4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.33■□□□□ 0.52
LYSMD3Q7Z3D4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LYSMD3Q7Z3D4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LYSMD3Q7Z3D4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LYSMD3Q7Z3D4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD3Q7Z3D4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD3Q7Z3D4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD3Q7Z3D4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.32■□□□□ 0.52
LYSMD3Q7Z3D4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.32■□□□□ 0.52
LYSMD3Q7Z3D4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD3Q7Z3D4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.32■□□□□ 0.52
LYSMD3Q7Z3D4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD3Q7Z3D4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
LYSMD3Q7Z3D4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD3Q7Z3D4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD3Q7Z3D4 VENTXP5-201ENST00000523979 775 ntBASIC18.32■□□□□ 0.52
LYSMD3Q7Z3D4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
LYSMD3Q7Z3D4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.32■□□□□ 0.52
LYSMD3Q7Z3D4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
LYSMD3Q7Z3D4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD3Q7Z3D4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LYSMD3Q7Z3D4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD3Q7Z3D4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD3Q7Z3D4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.32■□□□□ 0.52
LYSMD3Q7Z3D4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD3Q7Z3D4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD3Q7Z3D4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD3Q7Z3D4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD3Q7Z3D4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
LYSMD3Q7Z3D4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD3Q7Z3D4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.32■□□□□ 0.52
LYSMD3Q7Z3D4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD3Q7Z3D4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.32■□□□□ 0.52
LYSMD3Q7Z3D4 AP000997.3-201ENST00000623333 2250 ntBASIC18.32■□□□□ 0.52
LYSMD3Q7Z3D4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LYSMD3Q7Z3D4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LYSMD3Q7Z3D4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LYSMD3Q7Z3D4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LYSMD3Q7Z3D4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.31■□□□□ 0.52
LYSMD3Q7Z3D4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.31■□□□□ 0.52
LYSMD3Q7Z3D4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LYSMD3Q7Z3D4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LYSMD3Q7Z3D4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.31■□□□□ 0.52
LYSMD3Q7Z3D4 AL031133.1-201ENST00000406807 723 ntBASIC18.31■□□□□ 0.52
LYSMD3Q7Z3D4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LYSMD3Q7Z3D4 SPDYE13P-201ENST00000445314 798 ntBASIC18.31■□□□□ 0.52
LYSMD3Q7Z3D4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.31■□□□□ 0.52
LYSMD3Q7Z3D4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LYSMD3Q7Z3D4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.31■□□□□ 0.52
LYSMD3Q7Z3D4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LYSMD3Q7Z3D4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LYSMD3Q7Z3D4 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.31■□□□□ 0.52
LYSMD3Q7Z3D4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.31■□□□□ 0.52
LYSMD3Q7Z3D4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LYSMD3Q7Z3D4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
LYSMD3Q7Z3D4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.31■□□□□ 0.52
LYSMD3Q7Z3D4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LYSMD3Q7Z3D4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
LYSMD3Q7Z3D4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.31■□□□□ 0.52
LYSMD3Q7Z3D4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LYSMD3Q7Z3D4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.31■□□□□ 0.52
LYSMD3Q7Z3D4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.3■□□□□ 0.52
LYSMD3Q7Z3D4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYSMD3Q7Z3D4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYSMD3Q7Z3D4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms