Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1AQ71U36 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TUBA1AQ71U36 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1AQ71U36 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1AQ71U36 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TUBA1AQ71U36 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1AQ71U36 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1AQ71U36 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1AQ71U36 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1AQ71U36 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.86■□□□□ 0.29
TUBA1AQ71U36 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.86■□□□□ 0.29
TUBA1AQ71U36 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1AQ71U36 AC011506.1-201ENST00000474329 610 ntBASIC16.86■□□□□ 0.29
TUBA1AQ71U36 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.86■□□□□ 0.29
TUBA1AQ71U36 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1AQ71U36 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.86■□□□□ 0.29
TUBA1AQ71U36 AL355075.4-201ENST00000554988 638 ntBASIC16.86■□□□□ 0.29
TUBA1AQ71U36 REXO1L10P-201ENST00000615707 1290 ntBASIC16.86■□□□□ 0.29
TUBA1AQ71U36 REXO1L12P-201ENST00000622156 912 ntBASIC16.86■□□□□ 0.29
TUBA1AQ71U36 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1AQ71U36 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
TUBA1AQ71U36 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
TUBA1AQ71U36 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1AQ71U36 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1AQ71U36 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.86■□□□□ 0.29
TUBA1AQ71U36 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1AQ71U36 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1AQ71U36 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1AQ71U36 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1AQ71U36 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1AQ71U36 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TUBA1AQ71U36 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.86■□□□□ 0.29
TUBA1AQ71U36 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.86■□□□□ 0.29
TUBA1AQ71U36 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 Z85996.1-201ENST00000494644 937 ntBASIC16.85■□□□□ 0.29
TUBA1AQ71U36 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 KRT17P2-201ENST00000300992 1314 ntBASIC16.85■□□□□ 0.29
TUBA1AQ71U36 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 RCC2P6-201ENST00000526625 1557 ntBASIC16.85■□□□□ 0.29
TUBA1AQ71U36 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TUBA1AQ71U36 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms