Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 AC009065.1-201ENST00000564055 1225 ntBASIC17.04■□□□□ 0.32
REEP3Q6NUK4 AL353719.1-201ENST00000566847 864 ntBASIC17.04■□□□□ 0.32
REEP3Q6NUK4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
REEP3Q6NUK4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
REEP3Q6NUK4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.04■□□□□ 0.32
REEP3Q6NUK4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
REEP3Q6NUK4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.04■□□□□ 0.32
REEP3Q6NUK4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
REEP3Q6NUK4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.04■□□□□ 0.32
REEP3Q6NUK4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
REEP3Q6NUK4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
REEP3Q6NUK4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.04■□□□□ 0.32
REEP3Q6NUK4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
REEP3Q6NUK4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
REEP3Q6NUK4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
REEP3Q6NUK4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
REEP3Q6NUK4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
REEP3Q6NUK4 LTB4R2-202ENST00000528054 3092 ntBASIC17.03■□□□□ 0.32
REEP3Q6NUK4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
REEP3Q6NUK4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
REEP3Q6NUK4 UNC93B2-201ENST00000285383 730 ntBASIC17.03■□□□□ 0.32
REEP3Q6NUK4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
REEP3Q6NUK4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
REEP3Q6NUK4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.03■□□□□ 0.32
REEP3Q6NUK4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.03■□□□□ 0.32
REEP3Q6NUK4 WWOX-216ENST00000569818 525 ntBASIC17.03■□□□□ 0.32
REEP3Q6NUK4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.03■□□□□ 0.32
REEP3Q6NUK4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.03■□□□□ 0.32
REEP3Q6NUK4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.03■□□□□ 0.32
REEP3Q6NUK4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
REEP3Q6NUK4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
REEP3Q6NUK4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.03■□□□□ 0.32
REEP3Q6NUK4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
REEP3Q6NUK4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
REEP3Q6NUK4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
REEP3Q6NUK4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
REEP3Q6NUK4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
REEP3Q6NUK4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
REEP3Q6NUK4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
REEP3Q6NUK4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
REEP3Q6NUK4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
REEP3Q6NUK4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
REEP3Q6NUK4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.02■□□□□ 0.32
REEP3Q6NUK4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
REEP3Q6NUK4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.02■□□□□ 0.32
REEP3Q6NUK4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.02■□□□□ 0.32
REEP3Q6NUK4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
REEP3Q6NUK4 CR769767.2-201ENST00000622735 460 ntBASIC17.02■□□□□ 0.32
REEP3Q6NUK4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
REEP3Q6NUK4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
REEP3Q6NUK4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
REEP3Q6NUK4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
REEP3Q6NUK4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.02■□□□□ 0.31
REEP3Q6NUK4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
REEP3Q6NUK4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
REEP3Q6NUK4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.02■□□□□ 0.31
REEP3Q6NUK4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
REEP3Q6NUK4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
REEP3Q6NUK4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
REEP3Q6NUK4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
REEP3Q6NUK4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.02■□□□□ 0.31
REEP3Q6NUK4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
REEP3Q6NUK4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
REEP3Q6NUK4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
REEP3Q6NUK4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
REEP3Q6NUK4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
REEP3Q6NUK4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.01■□□□□ 0.31
REEP3Q6NUK4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
REEP3Q6NUK4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
REEP3Q6NUK4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
REEP3Q6NUK4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
REEP3Q6NUK4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
REEP3Q6NUK4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
REEP3Q6NUK4 AC093010.1-201ENST00000473625 1624 ntBASIC17.01■□□□□ 0.31
REEP3Q6NUK4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
REEP3Q6NUK4 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.01■□□□□ 0.31
REEP3Q6NUK4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
REEP3Q6NUK4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.01■□□□□ 0.31
REEP3Q6NUK4 CCR12P-201ENST00000446203 998 ntBASIC17.01■□□□□ 0.31
REEP3Q6NUK4 Z99916.2-201ENST00000604037 246 ntBASIC17.01■□□□□ 0.31
REEP3Q6NUK4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.01■□□□□ 0.31
REEP3Q6NUK4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
REEP3Q6NUK4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
REEP3Q6NUK4 AC020916.1-201ENST00000587762 1774 ntBASIC17.01■□□□□ 0.31
REEP3Q6NUK4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
REEP3Q6NUK4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
REEP3Q6NUK4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
REEP3Q6NUK4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.01■□□□□ 0.31
REEP3Q6NUK4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
REEP3Q6NUK4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
REEP3Q6NUK4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
REEP3Q6NUK4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
REEP3Q6NUK4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
REEP3Q6NUK4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.01■□□□□ 0.31
REEP3Q6NUK4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17■□□□□ 0.31
REEP3Q6NUK4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17■□□□□ 0.31
REEP3Q6NUK4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
REEP3Q6NUK4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17■□□□□ 0.31
REEP3Q6NUK4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
REEP3Q6NUK4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms