Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF43Q68DV7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF43Q68DV7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF43Q68DV7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RNF43Q68DV7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF43Q68DV7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF43Q68DV7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF43Q68DV7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RNF43Q68DV7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF43Q68DV7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF43Q68DV7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF43Q68DV7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF43Q68DV7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF43Q68DV7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF43Q68DV7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF43Q68DV7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF43Q68DV7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RNF43Q68DV7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF43Q68DV7 AC112907.2-201ENST00000448639 330 ntBASIC19.15■□□□□ 0.66
RNF43Q68DV7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF43Q68DV7 AL136038.3-201ENST00000561909 1096 ntBASIC19.15■□□□□ 0.66
RNF43Q68DV7 AC024243.1-201ENST00000609234 778 ntBASIC19.15■□□□□ 0.66
RNF43Q68DV7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF43Q68DV7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF43Q68DV7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF43Q68DV7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RNF43Q68DV7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RNF43Q68DV7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF43Q68DV7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF43Q68DV7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF43Q68DV7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RNF43Q68DV7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.15■□□□□ 0.66
RNF43Q68DV7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.14■□□□□ 0.66
RNF43Q68DV7 HEIH-201ENST00000623091 1652 ntBASIC19.14■□□□□ 0.66
RNF43Q68DV7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
RNF43Q68DV7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RNF43Q68DV7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RNF43Q68DV7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF43Q68DV7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF43Q68DV7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF43Q68DV7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF43Q68DV7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
RNF43Q68DV7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF43Q68DV7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF43Q68DV7 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.14■□□□□ 0.65
RNF43Q68DV7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.14■□□□□ 0.65
RNF43Q68DV7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.14■□□□□ 0.65
RNF43Q68DV7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.14■□□□□ 0.65
RNF43Q68DV7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF43Q68DV7 AC034232.1-201ENST00000506026 1064 ntBASIC19.14■□□□□ 0.65
RNF43Q68DV7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.14■□□□□ 0.65
RNF43Q68DV7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.14■□□□□ 0.65
RNF43Q68DV7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF43Q68DV7 AC104390.1-201ENST00000555663 520 ntBASIC19.14■□□□□ 0.65
RNF43Q68DV7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.14■□□□□ 0.65
RNF43Q68DV7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF43Q68DV7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF43Q68DV7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF43Q68DV7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF43Q68DV7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF43Q68DV7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF43Q68DV7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF43Q68DV7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF43Q68DV7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF43Q68DV7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF43Q68DV7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF43Q68DV7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF43Q68DV7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF43Q68DV7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF43Q68DV7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF43Q68DV7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF43Q68DV7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF43Q68DV7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF43Q68DV7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RNF43Q68DV7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF43Q68DV7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF43Q68DV7 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF43Q68DV7 HBZP1-201ENST00000354915 429 ntBASIC19.13■□□□□ 0.65
RNF43Q68DV7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF43Q68DV7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF43Q68DV7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF43Q68DV7 KRT18P41-201ENST00000518924 1277 ntBASIC19.13■□□□□ 0.65
RNF43Q68DV7 MIR3917-201ENST00000580971 93 ntBASIC19.13■□□□□ 0.65
RNF43Q68DV7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.13■□□□□ 0.65
RNF43Q68DV7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF43Q68DV7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF43Q68DV7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RNF43Q68DV7 MTMR9LP-203ENST00000426597 1545 ntBASIC19.13■□□□□ 0.65
RNF43Q68DV7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RNF43Q68DV7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF43Q68DV7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.13■□□□□ 0.65
RNF43Q68DV7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF43Q68DV7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF43Q68DV7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RNF43Q68DV7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF43Q68DV7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF43Q68DV7 FZD10-202ENST00000539839 3282 ntBASIC19.13■□□□□ 0.65
RNF43Q68DV7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF43Q68DV7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.12■□□□□ 0.65
RNF43Q68DV7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms