Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 MIR3687-1-201ENST00000614492 61 ntBASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LYSMD4Q5XG99 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 GPX1P2-201ENST00000429271 606 ntBASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 DNAJB3-201ENST00000446806 729 ntBASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 AC040169.1-201ENST00000565382 521 ntBASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD4Q5XG99 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 RPSAP43-201ENST00000402237 625 ntBASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 AC105339.3-201ENST00000560043 636 ntBASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 AC079781.4-201ENST00000641908 219 ntBASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.84■□□□□ 0.45
LYSMD4Q5XG99 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LYSMD4Q5XG99 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LYSMD4Q5XG99 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
LYSMD4Q5XG99 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LYSMD4Q5XG99 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LYSMD4Q5XG99 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LYSMD4Q5XG99 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LYSMD4Q5XG99 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.83■□□□□ 0.45
LYSMD4Q5XG99 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
LYSMD4Q5XG99 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.83■□□□□ 0.45
LYSMD4Q5XG99 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LYSMD4Q5XG99 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LYSMD4Q5XG99 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.83■□□□□ 0.44
LYSMD4Q5XG99 YBX2P1-201ENST00000394192 760 ntBASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms