Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.43■□□□□ 0.54
LGSNQ5TDP6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LGSNQ5TDP6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
LGSNQ5TDP6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
LGSNQ5TDP6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
LGSNQ5TDP6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.43■□□□□ 0.54
LGSNQ5TDP6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.43■□□□□ 0.54
LGSNQ5TDP6 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.43■□□□□ 0.54
LGSNQ5TDP6 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LGSNQ5TDP6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.43■□□□□ 0.54
LGSNQ5TDP6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LGSNQ5TDP6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LGSNQ5TDP6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LGSNQ5TDP6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LGSNQ5TDP6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LGSNQ5TDP6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LGSNQ5TDP6 PHGDH-209ENST00000641074 1780 ntBASIC18.42■□□□□ 0.54
LGSNQ5TDP6 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.42■□□□□ 0.54
LGSNQ5TDP6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LGSNQ5TDP6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.42■□□□□ 0.54
LGSNQ5TDP6 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LGSNQ5TDP6 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LGSNQ5TDP6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LGSNQ5TDP6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.42■□□□□ 0.54
LGSNQ5TDP6 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LGSNQ5TDP6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LGSNQ5TDP6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.42■□□□□ 0.54
LGSNQ5TDP6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LGSNQ5TDP6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
LGSNQ5TDP6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
LGSNQ5TDP6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LGSNQ5TDP6 AC008040.2-201ENST00000461049 708 ntBASIC18.42■□□□□ 0.54
LGSNQ5TDP6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
LGSNQ5TDP6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.42■□□□□ 0.54
LGSNQ5TDP6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.42■□□□□ 0.54
LGSNQ5TDP6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.42■□□□□ 0.54
LGSNQ5TDP6 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.42■□□□□ 0.54
LGSNQ5TDP6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
LGSNQ5TDP6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LGSNQ5TDP6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LGSNQ5TDP6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
LGSNQ5TDP6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
LGSNQ5TDP6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LGSNQ5TDP6 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
LGSNQ5TDP6 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LGSNQ5TDP6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LGSNQ5TDP6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.42■□□□□ 0.54
LGSNQ5TDP6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
LGSNQ5TDP6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.41■□□□□ 0.54
LGSNQ5TDP6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LGSNQ5TDP6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LGSNQ5TDP6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LGSNQ5TDP6 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.41■□□□□ 0.54
LGSNQ5TDP6 PRORSD1P-202ENST00000563365 2154 ntBASIC18.41■□□□□ 0.54
LGSNQ5TDP6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LGSNQ5TDP6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LGSNQ5TDP6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LGSNQ5TDP6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LGSNQ5TDP6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LGSNQ5TDP6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LGSNQ5TDP6 ESRRAP1-201ENST00000400596 1257 ntBASIC18.41■□□□□ 0.54
LGSNQ5TDP6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.41■□□□□ 0.54
LGSNQ5TDP6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.41■□□□□ 0.54
LGSNQ5TDP6 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.41■□□□□ 0.54
LGSNQ5TDP6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
LGSNQ5TDP6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.41■□□□□ 0.54
LGSNQ5TDP6 AC073195.1-201ENST00000607241 877 ntBASIC18.41■□□□□ 0.54
LGSNQ5TDP6 MIR6786-201ENST00000616843 113 ntBASIC18.41■□□□□ 0.54
LGSNQ5TDP6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LGSNQ5TDP6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.41■□□□□ 0.54
LGSNQ5TDP6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LGSNQ5TDP6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LGSNQ5TDP6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.41■□□□□ 0.54
LGSNQ5TDP6 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.41■□□□□ 0.54
LGSNQ5TDP6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
LGSNQ5TDP6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.41■□□□□ 0.54
LGSNQ5TDP6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.41■□□□□ 0.54
LGSNQ5TDP6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
LGSNQ5TDP6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LGSNQ5TDP6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LGSNQ5TDP6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.4■□□□□ 0.54
LGSNQ5TDP6 FSCN1P1-201ENST00000568912 1481 ntBASIC18.4■□□□□ 0.54
LGSNQ5TDP6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LGSNQ5TDP6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LGSNQ5TDP6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LGSNQ5TDP6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.4■□□□□ 0.54
LGSNQ5TDP6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LGSNQ5TDP6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.4■□□□□ 0.54
LGSNQ5TDP6 AL023284.2-201ENST00000405850 579 ntBASIC18.4■□□□□ 0.54
LGSNQ5TDP6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LGSNQ5TDP6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.4■□□□□ 0.54
LGSNQ5TDP6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.4■□□□□ 0.54
LGSNQ5TDP6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.4■□□□□ 0.54
LGSNQ5TDP6 AC008622.2-201ENST00000617006 1229 ntBASIC18.4■□□□□ 0.54
LGSNQ5TDP6 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LGSNQ5TDP6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LGSNQ5TDP6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LGSNQ5TDP6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LGSNQ5TDP6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.4■□□□□ 0.54
LGSNQ5TDP6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms