Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 KRT8P23-201ENST00000560090 1207 ntBASIC9.9□□□□□ -0.82
UBR4Q5T4S7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 AC099548.2-209ENST00000480264 625 ntBASIC9.9□□□□□ -0.82
UBR4Q5T4S7 AC097493.3-201ENST00000509725 367 ntBASIC9.9□□□□□ -0.82
UBR4Q5T4S7 SNX29P1-201ENST00000548357 1007 ntBASIC9.9□□□□□ -0.82
UBR4Q5T4S7 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 SPCS2P2-201ENST00000603270 608 ntBASIC9.9□□□□□ -0.82
UBR4Q5T4S7 MIR6775-201ENST00000617557 69 ntBASIC9.9□□□□□ -0.82
UBR4Q5T4S7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
UBR4Q5T4S7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC9.9□□□□□ -0.83
UBR4Q5T4S7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
UBR4Q5T4S7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC9.9□□□□□ -0.83
UBR4Q5T4S7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC9.9□□□□□ -0.83
UBR4Q5T4S7 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC9.9□□□□□ -0.83
UBR4Q5T4S7 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
UBR4Q5T4S7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
UBR4Q5T4S7 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC9.9□□□□□ -0.83
UBR4Q5T4S7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC9.9□□□□□ -0.83
UBR4Q5T4S7 AC020907.1-201ENST00000616460 1350 ntBASIC9.9□□□□□ -0.83
UBR4Q5T4S7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
UBR4Q5T4S7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
UBR4Q5T4S7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
UBR4Q5T4S7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 ANKRD18DP-204ENST00000455355 1975 ntBASIC9.89□□□□□ -0.83
UBR4Q5T4S7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 CDK4-206ENST00000549606 558 ntTSL 2 BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 AL021578.1-201ENST00000613646 709 ntBASIC9.89□□□□□ -0.83
UBR4Q5T4S7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 AC079776.2-201ENST00000641154 1609 ntBASIC9.89□□□□□ -0.83
UBR4Q5T4S7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 AC008735.3-201ENST00000596646 500 ntBASIC9.89□□□□□ -0.83
UBR4Q5T4S7 AC019129.2-201ENST00000609837 1235 ntBASIC9.89□□□□□ -0.83
UBR4Q5T4S7 MIR7845-201ENST00000618396 99 ntBASIC9.89□□□□□ -0.83
UBR4Q5T4S7 AL022326.1-202ENST00000641533 845 ntBASIC9.89□□□□□ -0.83
UBR4Q5T4S7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 CRYGEP-201ENST00000412192 528 ntBASIC9.89□□□□□ -0.83
UBR4Q5T4S7 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 AC004890.2-204ENST00000481968 304 ntBASIC9.89□□□□□ -0.83
UBR4Q5T4S7 AC132938.2-201ENST00000579188 680 ntBASIC9.89□□□□□ -0.83
UBR4Q5T4S7 AC006557.2-201ENST00000592985 1240 ntBASIC9.89□□□□□ -0.83
UBR4Q5T4S7 AL591163.1-201ENST00000641757 987 ntBASIC9.89□□□□□ -0.83
UBR4Q5T4S7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 LINC01521-201ENST00000504184 1943 ntBASIC9.89□□□□□ -0.83
UBR4Q5T4S7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC9.89□□□□□ -0.83
UBR4Q5T4S7 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 AC068472.1-201ENST00000474589 881 ntBASIC9.88□□□□□ -0.83
UBR4Q5T4S7 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms