Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRICKLE4Q2TBC4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.98■□□□□ 0.31
PRICKLE4Q2TBC4 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.98■□□□□ 0.31
PRICKLE4Q2TBC4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRICKLE4Q2TBC4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.98■□□□□ 0.31
PRICKLE4Q2TBC4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PRICKLE4Q2TBC4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.98■□□□□ 0.31
PRICKLE4Q2TBC4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PRICKLE4Q2TBC4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.98■□□□□ 0.31
PRICKLE4Q2TBC4 AC113404.2-201ENST00000507884 177 ntBASIC16.98■□□□□ 0.31
PRICKLE4Q2TBC4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.98■□□□□ 0.31
PRICKLE4Q2TBC4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.98■□□□□ 0.31
PRICKLE4Q2TBC4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRICKLE4Q2TBC4 AC083849.1-201ENST00000615227 514 ntBASIC16.98■□□□□ 0.31
PRICKLE4Q2TBC4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.98■□□□□ 0.31
PRICKLE4Q2TBC4 AC020763.4-201ENST00000623414 4170 ntBASIC16.98■□□□□ 0.31
PRICKLE4Q2TBC4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRICKLE4Q2TBC4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRICKLE4Q2TBC4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRICKLE4Q2TBC4 AC007613.1-201ENST00000572811 2597 ntBASIC16.98■□□□□ 0.31
PRICKLE4Q2TBC4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
PRICKLE4Q2TBC4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.98■□□□□ 0.31
PRICKLE4Q2TBC4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRICKLE4Q2TBC4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRICKLE4Q2TBC4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRICKLE4Q2TBC4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRICKLE4Q2TBC4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRICKLE4Q2TBC4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRICKLE4Q2TBC4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRICKLE4Q2TBC4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRICKLE4Q2TBC4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRICKLE4Q2TBC4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRICKLE4Q2TBC4 MIR662-201ENST00000384847 95 ntBASIC16.97■□□□□ 0.31
PRICKLE4Q2TBC4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PRICKLE4Q2TBC4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRICKLE4Q2TBC4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRICKLE4Q2TBC4 AL671277.2-201ENST00000458060 996 ntBASIC16.97■□□□□ 0.31
PRICKLE4Q2TBC4 VENTXP5-201ENST00000523979 775 ntBASIC16.97■□□□□ 0.31
PRICKLE4Q2TBC4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.97■□□□□ 0.31
PRICKLE4Q2TBC4 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.97■□□□□ 0.31
PRICKLE4Q2TBC4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PRICKLE4Q2TBC4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.97■□□□□ 0.31
PRICKLE4Q2TBC4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRICKLE4Q2TBC4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRICKLE4Q2TBC4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRICKLE4Q2TBC4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRICKLE4Q2TBC4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRICKLE4Q2TBC4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 AC138028.4-201ENST00000564984 1845 ntBASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 NOC2LP1-202ENST00000452600 2235 ntBASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 KRT18P48-201ENST00000434763 852 ntBASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 SPDYE13P-201ENST00000445314 798 ntBASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE4Q2TBC4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.3
PRICKLE4Q2TBC4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.3
PRICKLE4Q2TBC4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
PRICKLE4Q2TBC4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.96■□□□□ 0.3
PRICKLE4Q2TBC4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.96■□□□□ 0.3
PRICKLE4Q2TBC4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.96■□□□□ 0.3
PRICKLE4Q2TBC4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PRICKLE4Q2TBC4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.95■□□□□ 0.3
PRICKLE4Q2TBC4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRICKLE4Q2TBC4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRICKLE4Q2TBC4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms