Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFNB1P98172 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EFNB1P98172 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFNB1P98172 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFNB1P98172 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
EFNB1P98172 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFNB1P98172 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.31■□□□□ 0.2
EFNB1P98172 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.31■□□□□ 0.2
EFNB1P98172 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
EFNB1P98172 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.31■□□□□ 0.2
EFNB1P98172 AC006058.3-201ENST00000606217 1069 ntBASIC16.31■□□□□ 0.2
EFNB1P98172 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.31■□□□□ 0.2
EFNB1P98172 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
EFNB1P98172 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EFNB1P98172 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.31■□□□□ 0.2
EFNB1P98172 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EFNB1P98172 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
EFNB1P98172 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.31■□□□□ 0.2
EFNB1P98172 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.31■□□□□ 0.2
EFNB1P98172 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
EFNB1P98172 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
EFNB1P98172 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.31■□□□□ 0.2
EFNB1P98172 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
EFNB1P98172 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.3■□□□□ 0.2
EFNB1P98172 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFNB1P98172 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
EFNB1P98172 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFNB1P98172 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
EFNB1P98172 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.3■□□□□ 0.2
EFNB1P98172 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFNB1P98172 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.3■□□□□ 0.2
EFNB1P98172 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
EFNB1P98172 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFNB1P98172 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
EFNB1P98172 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.3■□□□□ 0.2
EFNB1P98172 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
EFNB1P98172 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
EFNB1P98172 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.3■□□□□ 0.2
EFNB1P98172 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EFNB1P98172 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
EFNB1P98172 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
EFNB1P98172 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.3■□□□□ 0.2
EFNB1P98172 AC128676.1-201ENST00000454392 318 ntBASIC16.3■□□□□ 0.2
EFNB1P98172 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.3■□□□□ 0.2
EFNB1P98172 RPPH1-201ENST00000516869 333 ntBASIC16.3■□□□□ 0.2
EFNB1P98172 C1QBPP2-201ENST00000528754 825 ntBASIC16.3■□□□□ 0.2
EFNB1P98172 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFNB1P98172 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.3■□□□□ 0.2
EFNB1P98172 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.3■□□□□ 0.2
EFNB1P98172 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.3■□□□□ 0.2
EFNB1P98172 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.3■□□□□ 0.2
EFNB1P98172 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFNB1P98172 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EFNB1P98172 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.3■□□□□ 0.2
EFNB1P98172 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.3■□□□□ 0.2
EFNB1P98172 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EFNB1P98172 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
EFNB1P98172 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB1P98172 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.29■□□□□ 0.2
EFNB1P98172 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
EFNB1P98172 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
EFNB1P98172 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.29■□□□□ 0.2
EFNB1P98172 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB1P98172 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB1P98172 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.29■□□□□ 0.2
EFNB1P98172 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB1P98172 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
EFNB1P98172 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB1P98172 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.29■□□□□ 0.2
EFNB1P98172 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.29■□□□□ 0.2
EFNB1P98172 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB1P98172 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.29■□□□□ 0.2
EFNB1P98172 SLC25A1P4-201ENST00000567977 778 ntBASIC16.29■□□□□ 0.2
EFNB1P98172 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.29■□□□□ 0.2
EFNB1P98172 AC132938.6-201ENST00000623828 1655 ntBASIC16.29■□□□□ 0.2
EFNB1P98172 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB1P98172 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB1P98172 AL121761.2-201ENST00000598007 1648 ntBASIC16.29■□□□□ 0.2
EFNB1P98172 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB1P98172 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB1P98172 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
EFNB1P98172 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB1P98172 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB1P98172 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.29■□□□□ 0.2
EFNB1P98172 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB1P98172 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB1P98172 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB1P98172 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB1P98172 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB1P98172 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB1P98172 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EFNB1P98172 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EFNB1P98172 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
EFNB1P98172 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
EFNB1P98172 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EFNB1P98172 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
EFNB1P98172 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EFNB1P98172 NKILA-202ENST00000614771 2598 ntBASIC16.28■□□□□ 0.2
EFNB1P98172 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
EFNB1P98172 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms