Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.75■□□□□ 0.27
CDH11P55287 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.75■□□□□ 0.27
CDH11P55287 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.75■□□□□ 0.27
CDH11P55287 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.75■□□□□ 0.27
CDH11P55287 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
CDH11P55287 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.75■□□□□ 0.27
CDH11P55287 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH11P55287 AC010331.1-201ENST00000611423 582 ntBASIC16.75■□□□□ 0.27
CDH11P55287 AC005363.2-201ENST00000618631 242 ntBASIC16.75■□□□□ 0.27
CDH11P55287 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH11P55287 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH11P55287 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CDH11P55287 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH11P55287 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH11P55287 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH11P55287 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH11P55287 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH11P55287 AL357033.4-201ENST00000617703 1807 ntBASIC16.75■□□□□ 0.27
CDH11P55287 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDH11P55287 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH11P55287 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CDH11P55287 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH11P55287 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.74■□□□□ 0.27
CDH11P55287 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH11P55287 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH11P55287 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CDH11P55287 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH11P55287 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH11P55287 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CDH11P55287 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.74■□□□□ 0.27
CDH11P55287 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH11P55287 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH11P55287 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CDH11P55287 TMPOP1-202ENST00000424642 1267 ntBASIC16.74■□□□□ 0.27
CDH11P55287 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CDH11P55287 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH11P55287 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH11P55287 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CDH11P55287 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH11P55287 AC011506.1-201ENST00000474329 610 ntBASIC16.74■□□□□ 0.27
CDH11P55287 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH11P55287 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CDH11P55287 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH11P55287 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH11P55287 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH11P55287 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH11P55287 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH11P55287 AC138028.4-201ENST00000564984 1845 ntBASIC16.74■□□□□ 0.27
CDH11P55287 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.74■□□□□ 0.27
CDH11P55287 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH11P55287 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CDH11P55287 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CDH11P55287 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH11P55287 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH11P55287 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH11P55287 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH11P55287 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH11P55287 CYP2D8P-201ENST00000433633 1490 ntBASIC16.73■□□□□ 0.27
CDH11P55287 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH11P55287 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH11P55287 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH11P55287 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH11P55287 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH11P55287 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CDH11P55287 LINC00896-202ENST00000609602 2128 ntBASIC16.73■□□□□ 0.27
CDH11P55287 KRT18P22-201ENST00000402024 1347 ntBASIC16.73■□□□□ 0.27
CDH11P55287 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH11P55287 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH11P55287 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CDH11P55287 KRT8P3-201ENST00000519669 1449 ntBASIC16.73■□□□□ 0.27
CDH11P55287 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH11P55287 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH11P55287 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.73■□□□□ 0.27
CDH11P55287 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH11P55287 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CDH11P55287 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH11P55287 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.73■□□□□ 0.27
CDH11P55287 Z85996.1-201ENST00000494644 937 ntBASIC16.73■□□□□ 0.27
CDH11P55287 AC097488.1-201ENST00000507834 756 ntBASIC16.73■□□□□ 0.27
CDH11P55287 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.73■□□□□ 0.27
CDH11P55287 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.73■□□□□ 0.27
CDH11P55287 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.73■□□□□ 0.27
CDH11P55287 C2orf69P3-201ENST00000565542 1120 ntBASIC16.73■□□□□ 0.27
CDH11P55287 RN7SL850P-201ENST00000579959 291 ntBASIC16.73■□□□□ 0.27
CDH11P55287 AP005242.2-201ENST00000580065 1175 ntBASIC16.73■□□□□ 0.27
CDH11P55287 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.73■□□□□ 0.27
CDH11P55287 AC011298.2-201ENST00000617989 482 ntBASIC16.73■□□□□ 0.27
CDH11P55287 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH11P55287 AC010947.1-201ENST00000623454 693 ntBASIC16.73■□□□□ 0.27
CDH11P55287 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CDH11P55287 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH11P55287 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH11P55287 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
CDH11P55287 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH11P55287 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH11P55287 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH11P55287 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH11P55287 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH11P55287 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH11P55287 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms