Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.32■□□□□ 0.68
CACNA2D1P54289 AC092119.3-201ENST00000612618 583 ntBASIC19.32■□□□□ 0.68
CACNA2D1P54289 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.32■□□□□ 0.68
CACNA2D1P54289 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA2D1P54289 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA2D1P54289 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.32■□□□□ 0.68
CACNA2D1P54289 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.32■□□□□ 0.68
CACNA2D1P54289 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.31■□□□□ 0.68
CACNA2D1P54289 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CACNA2D1P54289 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.31■□□□□ 0.68
CACNA2D1P54289 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.31■□□□□ 0.68
CACNA2D1P54289 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.31■□□□□ 0.68
CACNA2D1P54289 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
CACNA2D1P54289 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CACNA2D1P54289 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA2D1P54289 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA2D1P54289 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA2D1P54289 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA2D1P54289 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.31■□□□□ 0.68
CACNA2D1P54289 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA2D1P54289 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA2D1P54289 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA2D1P54289 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA2D1P54289 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA2D1P54289 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA2D1P54289 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CACNA2D1P54289 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA2D1P54289 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA2D1P54289 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.31■□□□□ 0.68
CACNA2D1P54289 ATP5G2P1-201ENST00000433580 426 ntBASIC19.31■□□□□ 0.68
CACNA2D1P54289 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.31■□□□□ 0.68
CACNA2D1P54289 TSSC2-201ENST00000450217 709 ntBASIC19.31■□□□□ 0.68
CACNA2D1P54289 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.31■□□□□ 0.68
CACNA2D1P54289 KRT8P26-201ENST00000534154 1276 ntBASIC19.31■□□□□ 0.68
CACNA2D1P54289 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.31■□□□□ 0.68
CACNA2D1P54289 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.31■□□□□ 0.68
CACNA2D1P54289 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.31■□□□□ 0.68
CACNA2D1P54289 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.31■□□□□ 0.68
CACNA2D1P54289 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA2D1P54289 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CACNA2D1P54289 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.31■□□□□ 0.68
CACNA2D1P54289 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA2D1P54289 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA2D1P54289 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA2D1P54289 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA2D1P54289 WIZP1-201ENST00000531444 2299 ntBASIC19.31■□□□□ 0.68
CACNA2D1P54289 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.31■□□□□ 0.68
CACNA2D1P54289 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.31■□□□□ 0.68
CACNA2D1P54289 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA2D1P54289 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CACNA2D1P54289 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CACNA2D1P54289 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.3■□□□□ 0.68
CACNA2D1P54289 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CACNA2D1P54289 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CACNA2D1P54289 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CACNA2D1P54289 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CACNA2D1P54289 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CACNA2D1P54289 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CACNA2D1P54289 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CACNA2D1P54289 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.3■□□□□ 0.68
CACNA2D1P54289 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CACNA2D1P54289 BX276092.5-203ENST00000456199 560 ntBASIC19.3■□□□□ 0.68
CACNA2D1P54289 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
CACNA2D1P54289 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.3■□□□□ 0.68
CACNA2D1P54289 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.3■□□□□ 0.68
CACNA2D1P54289 MIR3180-1-201ENST00000580374 94 ntBASIC19.3■□□□□ 0.68
CACNA2D1P54289 MIR3180-3-201ENST00000584616 94 ntBASIC19.3■□□□□ 0.68
CACNA2D1P54289 AL121672.3-201ENST00000608644 468 ntBASIC19.3■□□□□ 0.68
CACNA2D1P54289 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CACNA2D1P54289 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.3■□□□□ 0.68
CACNA2D1P54289 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.3■□□□□ 0.68
CACNA2D1P54289 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CACNA2D1P54289 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.3■□□□□ 0.68
CACNA2D1P54289 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CACNA2D1P54289 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CACNA2D1P54289 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CACNA2D1P54289 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CACNA2D1P54289 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CACNA2D1P54289 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CACNA2D1P54289 FZD10-202ENST00000539839 3282 ntBASIC19.3■□□□□ 0.68
CACNA2D1P54289 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CACNA2D1P54289 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CACNA2D1P54289 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CACNA2D1P54289 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CACNA2D1P54289 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CACNA2D1P54289 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CACNA2D1P54289 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.3■□□□□ 0.68
CACNA2D1P54289 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.3■□□□□ 0.68
CACNA2D1P54289 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.3■□□□□ 0.68
CACNA2D1P54289 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CACNA2D1P54289 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CACNA2D1P54289 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CACNA2D1P54289 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
CACNA2D1P54289 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CACNA2D1P54289 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CACNA2D1P54289 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CACNA2D1P54289 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CACNA2D1P54289 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CACNA2D1P54289 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CACNA2D1P54289 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms