Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 AC006116.8-202ENST00000587620 1550 ntBASIC17.48■□□□□ 0.39
POLR2JP52435 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2JP52435 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2JP52435 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2JP52435 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
POLR2JP52435 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2JP52435 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2JP52435 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2JP52435 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
POLR2JP52435 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.47■□□□□ 0.39
POLR2JP52435 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.47■□□□□ 0.39
POLR2JP52435 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2JP52435 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
POLR2JP52435 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2JP52435 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2JP52435 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
POLR2JP52435 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2JP52435 MIR149-201ENST00000384879 89 ntBASIC17.47■□□□□ 0.39
POLR2JP52435 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2JP52435 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
POLR2JP52435 FAM197Y1-201ENST00000421178 764 ntBASIC17.47■□□□□ 0.39
POLR2JP52435 MFAP1P1-201ENST00000442257 1255 ntBASIC17.47■□□□□ 0.39
POLR2JP52435 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.47■□□□□ 0.39
POLR2JP52435 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.47■□□□□ 0.39
POLR2JP52435 SLC25A1P4-201ENST00000567977 778 ntBASIC17.47■□□□□ 0.39
POLR2JP52435 MIR3180-5-201ENST00000583743 153 ntBASIC17.47■□□□□ 0.39
POLR2JP52435 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
POLR2JP52435 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2JP52435 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.47■□□□□ 0.39
POLR2JP52435 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2JP52435 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.47■□□□□ 0.39
POLR2JP52435 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.47■□□□□ 0.39
POLR2JP52435 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2JP52435 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
POLR2JP52435 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2JP52435 PRORSD1P-202ENST00000563365 2154 ntBASIC17.47■□□□□ 0.39
POLR2JP52435 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2JP52435 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2JP52435 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2JP52435 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2JP52435 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.47■□□□□ 0.39
POLR2JP52435 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2JP52435 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.47■□□□□ 0.39
POLR2JP52435 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2JP52435 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.47■□□□□ 0.39
POLR2JP52435 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.46■□□□□ 0.39
POLR2JP52435 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2JP52435 AL645608.8-201ENST00000606034 2086 ntBASIC17.46■□□□□ 0.39
POLR2JP52435 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.46■□□□□ 0.39
POLR2JP52435 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2JP52435 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.46■□□□□ 0.39
POLR2JP52435 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.46■□□□□ 0.39
POLR2JP52435 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
POLR2JP52435 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.46■□□□□ 0.39
POLR2JP52435 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.46■□□□□ 0.39
POLR2JP52435 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
POLR2JP52435 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2JP52435 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.46■□□□□ 0.39
POLR2JP52435 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2JP52435 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.46■□□□□ 0.39
POLR2JP52435 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.46■□□□□ 0.39
POLR2JP52435 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
POLR2JP52435 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.46■□□□□ 0.39
POLR2JP52435 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.46■□□□□ 0.39
POLR2JP52435 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2JP52435 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.46■□□□□ 0.39
POLR2JP52435 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
POLR2JP52435 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.46■□□□□ 0.39
POLR2JP52435 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2JP52435 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
POLR2JP52435 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.46■□□□□ 0.39
POLR2JP52435 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2JP52435 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2JP52435 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2JP52435 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2JP52435 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2JP52435 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
POLR2JP52435 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
POLR2JP52435 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2JP52435 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2JP52435 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2JP52435 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.45■□□□□ 0.38
POLR2JP52435 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2JP52435 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR2JP52435 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
POLR2JP52435 AC036111.1-201ENST00000533973 1582 ntBASIC17.45■□□□□ 0.38
POLR2JP52435 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2JP52435 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2JP52435 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR2JP52435 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2JP52435 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2JP52435 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2JP52435 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
POLR2JP52435 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
POLR2JP52435 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2JP52435 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
POLR2JP52435 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
POLR2JP52435 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.45■□□□□ 0.38
POLR2JP52435 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR2JP52435 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms