Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 AC009947.2-201ENST00000444014 672 ntBASIC19.73■□□□□ 0.75
PDE6CP51160 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.73■□□□□ 0.75
PDE6CP51160 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.73■□□□□ 0.75
PDE6CP51160 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDE6CP51160 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.73■□□□□ 0.75
PDE6CP51160 AL023973.1-201ENST00000624619 620 ntBASIC19.73■□□□□ 0.75
PDE6CP51160 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDE6CP51160 KRT8P7-201ENST00000533003 1432 ntBASIC19.73■□□□□ 0.75
PDE6CP51160 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDE6CP51160 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PDE6CP51160 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.73■□□□□ 0.75
PDE6CP51160 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.73■□□□□ 0.75
PDE6CP51160 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.73■□□□□ 0.75
PDE6CP51160 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDE6CP51160 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PDE6CP51160 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDE6CP51160 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDE6CP51160 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDE6CP51160 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.73■□□□□ 0.75
PDE6CP51160 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDE6CP51160 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PDE6CP51160 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDE6CP51160 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.72■□□□□ 0.75
PDE6CP51160 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PDE6CP51160 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PDE6CP51160 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDE6CP51160 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDE6CP51160 AC135776.1-201ENST00000319817 2481 ntBASIC19.72■□□□□ 0.75
PDE6CP51160 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.72■□□□□ 0.75
PDE6CP51160 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.72■□□□□ 0.75
PDE6CP51160 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.72■□□□□ 0.75
PDE6CP51160 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDE6CP51160 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PDE6CP51160 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDE6CP51160 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDE6CP51160 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDE6CP51160 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDE6CP51160 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
PDE6CP51160 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
PDE6CP51160 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDE6CP51160 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.72■□□□□ 0.75
PDE6CP51160 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PDE6CP51160 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDE6CP51160 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PDE6CP51160 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDE6CP51160 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PDE6CP51160 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDE6CP51160 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDE6CP51160 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.71■□□□□ 0.75
PDE6CP51160 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.71■□□□□ 0.75
PDE6CP51160 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.71■□□□□ 0.75
PDE6CP51160 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDE6CP51160 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.71■□□□□ 0.75
PDE6CP51160 AL441883.1-201ENST00000566170 1045 ntBASIC19.71■□□□□ 0.75
PDE6CP51160 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDE6CP51160 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.71■□□□□ 0.75
PDE6CP51160 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDE6CP51160 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDE6CP51160 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.71■□□□□ 0.75
PDE6CP51160 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PDE6CP51160 AL121956.5-201ENST00000625261 221 ntBASIC19.71■□□□□ 0.75
PDE6CP51160 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDE6CP51160 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.71■□□□□ 0.75
PDE6CP51160 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDE6CP51160 HTR7P1-202ENST00000624664 4411 ntBASIC19.71■□□□□ 0.75
PDE6CP51160 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDE6CP51160 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.71■□□□□ 0.75
PDE6CP51160 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PDE6CP51160 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDE6CP51160 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDE6CP51160 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
PDE6CP51160 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDE6CP51160 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PDE6CP51160 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.71■□□□□ 0.74
PDE6CP51160 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDE6CP51160 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDE6CP51160 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDE6CP51160 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.7■□□□□ 0.74
PDE6CP51160 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDE6CP51160 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDE6CP51160 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDE6CP51160 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDE6CP51160 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDE6CP51160 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDE6CP51160 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
PDE6CP51160 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDE6CP51160 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.7■□□□□ 0.74
PDE6CP51160 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.7■□□□□ 0.74
PDE6CP51160 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDE6CP51160 AL031133.1-201ENST00000406807 723 ntBASIC19.7■□□□□ 0.74
PDE6CP51160 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.7■□□□□ 0.74
PDE6CP51160 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.7■□□□□ 0.74
PDE6CP51160 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
PDE6CP51160 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.7■□□□□ 0.74
PDE6CP51160 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.7■□□□□ 0.74
PDE6CP51160 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDE6CP51160 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PDE6CP51160 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDE6CP51160 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
PDE6CP51160 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms