Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF144AP50876 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF144AP50876 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.97■□□□□ 0.31
RNF144AP50876 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF144AP50876 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF144AP50876 AC010653.2-201ENST00000623505 997 ntBASIC16.97■□□□□ 0.31
RNF144AP50876 AC073912.3-201ENST00000624414 853 ntBASIC16.97■□□□□ 0.31
RNF144AP50876 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF144AP50876 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNF144AP50876 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNF144AP50876 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF144AP50876 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF144AP50876 REXO1L9P-201ENST00000604264 2108 ntBASIC16.97■□□□□ 0.31
RNF144AP50876 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RNF144AP50876 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF144AP50876 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF144AP50876 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNF144AP50876 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF144AP50876 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
RNF144AP50876 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RNF144AP50876 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF144AP50876 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF144AP50876 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF144AP50876 KRT18P22-201ENST00000402024 1347 ntBASIC16.96■□□□□ 0.31
RNF144AP50876 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RNF144AP50876 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF144AP50876 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF144AP50876 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.96■□□□□ 0.31
RNF144AP50876 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.96■□□□□ 0.31
RNF144AP50876 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF144AP50876 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF144AP50876 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF144AP50876 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF144AP50876 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.96■□□□□ 0.31
RNF144AP50876 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.96■□□□□ 0.31
RNF144AP50876 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RNF144AP50876 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.96■□□□□ 0.31
RNF144AP50876 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF144AP50876 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF144AP50876 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF144AP50876 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF144AP50876 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.96■□□□□ 0.31
RNF144AP50876 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.96■□□□□ 0.31
RNF144AP50876 KRT18P57-201ENST00000443599 1254 ntBASIC16.96■□□□□ 0.31
RNF144AP50876 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF144AP50876 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF144AP50876 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.96■□□□□ 0.31
RNF144AP50876 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RNF144AP50876 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.96■□□□□ 0.31
RNF144AP50876 AC145285.6-201ENST00000604632 637 ntBASIC16.96■□□□□ 0.31
RNF144AP50876 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.96■□□□□ 0.31
RNF144AP50876 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF144AP50876 AC112497.1-201ENST00000624824 639 ntBASIC16.96■□□□□ 0.31
RNF144AP50876 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
RNF144AP50876 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
RNF144AP50876 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF144AP50876 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
RNF144AP50876 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.96■□□□□ 0.31
RNF144AP50876 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF144AP50876 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF144AP50876 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RNF144AP50876 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF144AP50876 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.3
RNF144AP50876 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
RNF144AP50876 ABALON-201ENST00000629058 1903 ntBASIC16.96■□□□□ 0.3
RNF144AP50876 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RNF144AP50876 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
RNF144AP50876 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RNF144AP50876 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RNF144AP50876 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.96■□□□□ 0.3
RNF144AP50876 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.3
RNF144AP50876 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF144AP50876 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF144AP50876 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF144AP50876 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF144AP50876 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF144AP50876 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
RNF144AP50876 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
RNF144AP50876 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF144AP50876 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
RNF144AP50876 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
RNF144AP50876 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF144AP50876 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF144AP50876 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF144AP50876 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.95■□□□□ 0.3
RNF144AP50876 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF144AP50876 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
RNF144AP50876 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF144AP50876 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF144AP50876 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.95■□□□□ 0.3
RNF144AP50876 HMGA1P5-201ENST00000412453 271 ntBASIC16.95■□□□□ 0.3
RNF144AP50876 AC211429.1-201ENST00000415277 523 ntBASIC16.95■□□□□ 0.3
RNF144AP50876 SLC25A3P1-201ENST00000443844 931 ntBASIC16.95■□□□□ 0.3
RNF144AP50876 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.95■□□□□ 0.3
RNF144AP50876 WWOX-216ENST00000569818 525 ntBASIC16.95■□□□□ 0.3
RNF144AP50876 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.95■□□□□ 0.3
RNF144AP50876 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RNF144AP50876 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
RNF144AP50876 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF144AP50876 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms