Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDC34P49427 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDC34P49427 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDC34P49427 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDC34P49427 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDC34P49427 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
CDC34P49427 AL513477.1-201ENST00000602865 2407 ntBASIC14.44□□□□□ -0.1
CDC34P49427 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDC34P49427 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDC34P49427 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.44□□□□□ -0.1
CDC34P49427 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDC34P49427 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDC34P49427 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CDC34P49427 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CDC34P49427 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.44□□□□□ -0.1
CDC34P49427 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.44□□□□□ -0.1
CDC34P49427 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDC34P49427 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDC34P49427 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.43□□□□□ -0.1
CDC34P49427 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDC34P49427 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDC34P49427 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.43□□□□□ -0.1
CDC34P49427 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDC34P49427 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDC34P49427 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDC34P49427 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDC34P49427 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDC34P49427 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CDC34P49427 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDC34P49427 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDC34P49427 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
CDC34P49427 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDC34P49427 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDC34P49427 METTL26-203ENST00000397664 604 ntTSL 2 BASIC14.43□□□□□ -0.1
CDC34P49427 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDC34P49427 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC14.43□□□□□ -0.1
CDC34P49427 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDC34P49427 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDC34P49427 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDC34P49427 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDC34P49427 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.43□□□□□ -0.1
CDC34P49427 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
CDC34P49427 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.43□□□□□ -0.1
CDC34P49427 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDC34P49427 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.43□□□□□ -0.1
CDC34P49427 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.43□□□□□ -0.1
CDC34P49427 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDC34P49427 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDC34P49427 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CDC34P49427 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.43□□□□□ -0.1
CDC34P49427 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC34P49427 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC34P49427 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC34P49427 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
CDC34P49427 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CDC34P49427 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CDC34P49427 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC34P49427 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CDC34P49427 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC34P49427 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.42□□□□□ -0.1
CDC34P49427 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC34P49427 KRT8P3-201ENST00000519669 1449 ntBASIC14.42□□□□□ -0.1
CDC34P49427 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC34P49427 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
CDC34P49427 KRT8P41-201ENST00000533985 1514 ntBASIC14.42□□□□□ -0.1
CDC34P49427 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.42□□□□□ -0.1
CDC34P49427 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC34P49427 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC34P49427 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDC34P49427 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC34P49427 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC34P49427 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDC34P49427 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDC34P49427 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDC34P49427 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDC34P49427 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC14.42□□□□□ -0.1
CDC34P49427 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC14.42□□□□□ -0.1
CDC34P49427 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CDC34P49427 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.42□□□□□ -0.1
CDC34P49427 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDC34P49427 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC34P49427 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC34P49427 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDC34P49427 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC34P49427 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC34P49427 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDC34P49427 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDC34P49427 AC006116.8-202ENST00000587620 1550 ntBASIC14.42□□□□□ -0.1
CDC34P49427 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDC34P49427 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC34P49427 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDC34P49427 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
CDC34P49427 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDC34P49427 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC34P49427 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CDC34P49427 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CDC34P49427 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC34P49427 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC34P49427 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC34P49427 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms