Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MMP13P45452 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.98■□□□□ 0.63
MMP13P45452 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MMP13P45452 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
MMP13P45452 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MMP13P45452 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MMP13P45452 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
MMP13P45452 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MMP13P45452 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MMP13P45452 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MMP13P45452 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
MMP13P45452 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.98■□□□□ 0.63
MMP13P45452 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
MMP13P45452 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MMP13P45452 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MMP13P45452 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.98■□□□□ 0.63
MMP13P45452 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.98■□□□□ 0.63
MMP13P45452 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.98■□□□□ 0.63
MMP13P45452 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MMP13P45452 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.98■□□□□ 0.63
MMP13P45452 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MMP13P45452 LINC01023-201ENST00000606054 436 ntBASIC18.98■□□□□ 0.63
MMP13P45452 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
MMP13P45452 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
MMP13P45452 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.98■□□□□ 0.63
MMP13P45452 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MMP13P45452 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MMP13P45452 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.98■□□□□ 0.63
MMP13P45452 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.98■□□□□ 0.63
MMP13P45452 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.98■□□□□ 0.63
MMP13P45452 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
MMP13P45452 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP13P45452 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.97■□□□□ 0.63
MMP13P45452 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
MMP13P45452 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
MMP13P45452 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.97■□□□□ 0.63
MMP13P45452 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
MMP13P45452 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP13P45452 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP13P45452 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MMP13P45452 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP13P45452 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
MMP13P45452 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MMP13P45452 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.97■□□□□ 0.63
MMP13P45452 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.97■□□□□ 0.63
MMP13P45452 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
MMP13P45452 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP13P45452 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP13P45452 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
MMP13P45452 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
MMP13P45452 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP13P45452 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MMP13P45452 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP13P45452 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP13P45452 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP13P45452 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP13P45452 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MMP13P45452 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
MMP13P45452 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP13P45452 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MMP13P45452 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.96■□□□□ 0.63
MMP13P45452 AC034236.2-201ENST00000606662 1610 ntBASIC18.96■□□□□ 0.63
MMP13P45452 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP13P45452 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.96■□□□□ 0.63
MMP13P45452 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.96■□□□□ 0.63
MMP13P45452 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
MMP13P45452 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MMP13P45452 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.96■□□□□ 0.63
MMP13P45452 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP13P45452 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.96■□□□□ 0.63
MMP13P45452 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.96■□□□□ 0.63
MMP13P45452 AC005363.2-201ENST00000618631 242 ntBASIC18.96■□□□□ 0.63
MMP13P45452 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MMP13P45452 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.96■□□□□ 0.63
MMP13P45452 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.96■□□□□ 0.63
MMP13P45452 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
MMP13P45452 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
MMP13P45452 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
MMP13P45452 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
MMP13P45452 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.96■□□□□ 0.63
MMP13P45452 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP13P45452 AL499627.1-201ENST00000569373 2188 ntBASIC18.96■□□□□ 0.63
MMP13P45452 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP13P45452 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.96■□□□□ 0.63
MMP13P45452 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP13P45452 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MMP13P45452 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MMP13P45452 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MMP13P45452 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP13P45452 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP13P45452 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.95■□□□□ 0.62
MMP13P45452 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP13P45452 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MMP13P45452 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
MMP13P45452 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MMP13P45452 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
MMP13P45452 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP13P45452 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.95■□□□□ 0.62
MMP13P45452 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP13P45452 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms