Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSR1P43307 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.43■□□□□ 0.7
SSR1P43307 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSR1P43307 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.43■□□□□ 0.7
SSR1P43307 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SSR1P43307 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SSR1P43307 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
SSR1P43307 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSR1P43307 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
SSR1P43307 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSR1P43307 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.43■□□□□ 0.7
SSR1P43307 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSR1P43307 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.43■□□□□ 0.7
SSR1P43307 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSR1P43307 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.43■□□□□ 0.7
SSR1P43307 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
SSR1P43307 AL390955.1-201ENST00000428694 934 ntBASIC19.43■□□□□ 0.7
SSR1P43307 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SSR1P43307 CA15P1-201ENST00000481698 905 ntBASIC19.43■□□□□ 0.7
SSR1P43307 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.43■□□□□ 0.7
SSR1P43307 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.43■□□□□ 0.7
SSR1P43307 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SSR1P43307 AP000525.1-201ENST00000608286 694 ntBASIC19.43■□□□□ 0.7
SSR1P43307 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.43■□□□□ 0.7
SSR1P43307 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSR1P43307 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSR1P43307 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSR1P43307 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSR1P43307 AC005332.8-201ENST00000622750 2735 ntBASIC19.43■□□□□ 0.7
SSR1P43307 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SSR1P43307 AC135776.1-201ENST00000319817 2481 ntBASIC19.43■□□□□ 0.7
SSR1P43307 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSR1P43307 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSR1P43307 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SSR1P43307 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SSR1P43307 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.42■□□□□ 0.7
SSR1P43307 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSR1P43307 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSR1P43307 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.42■□□□□ 0.7
SSR1P43307 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSR1P43307 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSR1P43307 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSR1P43307 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSR1P43307 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SSR1P43307 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSR1P43307 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSR1P43307 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSR1P43307 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.42■□□□□ 0.7
SSR1P43307 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.42■□□□□ 0.7
SSR1P43307 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.42■□□□□ 0.7
SSR1P43307 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.42■□□□□ 0.7
SSR1P43307 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.42■□□□□ 0.7
SSR1P43307 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.42■□□□□ 0.7
SSR1P43307 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSR1P43307 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSR1P43307 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSR1P43307 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSR1P43307 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSR1P43307 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSR1P43307 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.42■□□□□ 0.7
SSR1P43307 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSR1P43307 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSR1P43307 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.42■□□□□ 0.7
SSR1P43307 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSR1P43307 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.42■□□□□ 0.7
SSR1P43307 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSR1P43307 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSR1P43307 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SSR1P43307 AC036111.1-201ENST00000533973 1582 ntBASIC19.41■□□□□ 0.7
SSR1P43307 AC034236.2-201ENST00000606662 1610 ntBASIC19.41■□□□□ 0.7
SSR1P43307 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSR1P43307 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSR1P43307 MIR1238-201ENST00000408483 83 ntBASIC19.41■□□□□ 0.7
SSR1P43307 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.41■□□□□ 0.7
SSR1P43307 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SSR1P43307 AP005242.2-201ENST00000580065 1175 ntBASIC19.41■□□□□ 0.7
SSR1P43307 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.41■□□□□ 0.7
SSR1P43307 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SSR1P43307 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SSR1P43307 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SSR1P43307 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SSR1P43307 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SSR1P43307 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SSR1P43307 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SSR1P43307 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.41■□□□□ 0.7
SSR1P43307 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSR1P43307 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSR1P43307 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC19.41■□□□□ 0.7
SSR1P43307 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSR1P43307 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SSR1P43307 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.4■□□□□ 0.7
SSR1P43307 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSR1P43307 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.4■□□□□ 0.7
SSR1P43307 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.4■□□□□ 0.7
SSR1P43307 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSR1P43307 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.4■□□□□ 0.7
SSR1P43307 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.4■□□□□ 0.7
SSR1P43307 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SSR1P43307 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.4■□□□□ 0.7
SSR1P43307 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms