Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
USP8P40818 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
USP8P40818 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP8P40818 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP8P40818 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP8P40818 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP8P40818 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP8P40818 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.89■□□□□ 0.77
USP8P40818 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP8P40818 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP8P40818 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.89■□□□□ 0.77
USP8P40818 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.89■□□□□ 0.77
USP8P40818 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP8P40818 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
USP8P40818 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
USP8P40818 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
USP8P40818 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP8P40818 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP8P40818 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.89■□□□□ 0.77
USP8P40818 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP8P40818 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
USP8P40818 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP8P40818 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP8P40818 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP8P40818 BICD1-207ENST00000551848 1962 ntBASIC19.88■□□□□ 0.77
USP8P40818 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP8P40818 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP8P40818 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP8P40818 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
USP8P40818 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
USP8P40818 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.88■□□□□ 0.77
USP8P40818 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP8P40818 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.88■□□□□ 0.77
USP8P40818 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP8P40818 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.88■□□□□ 0.77
USP8P40818 CR769767.2-201ENST00000622735 460 ntBASIC19.88■□□□□ 0.77
USP8P40818 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.88■□□□□ 0.77
USP8P40818 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP8P40818 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
USP8P40818 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP8P40818 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP8P40818 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP8P40818 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.88■□□□□ 0.77
USP8P40818 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.88■□□□□ 0.77
USP8P40818 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP8P40818 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP8P40818 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.87■□□□□ 0.77
USP8P40818 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.87■□□□□ 0.77
USP8P40818 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP8P40818 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP8P40818 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP8P40818 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP8P40818 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP8P40818 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.87■□□□□ 0.77
USP8P40818 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.87■□□□□ 0.77
USP8P40818 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP8P40818 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP8P40818 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.87■□□□□ 0.77
USP8P40818 EGLN1P1-201ENST00000531623 762 ntBASIC19.87■□□□□ 0.77
USP8P40818 AC010947.1-201ENST00000623454 693 ntBASIC19.87■□□□□ 0.77
USP8P40818 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP8P40818 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP8P40818 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP8P40818 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
USP8P40818 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP8P40818 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.86■□□□□ 0.77
USP8P40818 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP8P40818 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP8P40818 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.86■□□□□ 0.77
USP8P40818 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP8P40818 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
USP8P40818 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP8P40818 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USP8P40818 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
USP8P40818 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
USP8P40818 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.86■□□□□ 0.77
USP8P40818 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USP8P40818 TSPY14P-201ENST00000303979 915 ntBASIC19.86■□□□□ 0.77
USP8P40818 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.86■□□□□ 0.77
USP8P40818 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
USP8P40818 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.86■□□□□ 0.77
USP8P40818 AC128688.1-201ENST00000487626 519 ntBASIC19.86■□□□□ 0.77
USP8P40818 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.86■□□□□ 0.77
USP8P40818 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP8P40818 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP8P40818 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP8P40818 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP8P40818 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
USP8P40818 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USP8P40818 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP8P40818 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
USP8P40818 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP8P40818 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP8P40818 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP8P40818 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.85■□□□□ 0.77
USP8P40818 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP8P40818 KRT18P41-201ENST00000518924 1277 ntBASIC19.85■□□□□ 0.77
USP8P40818 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.85■□□□□ 0.77
USP8P40818 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.85■□□□□ 0.77
USP8P40818 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms