Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP6V1AP38606 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP6V1AP38606 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP6V1AP38606 LINC01126-201ENST00000623515 1646 ntBASIC23.2■■□□□ 1.3
ATP6V1AP38606 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP6V1AP38606 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC23.2■■□□□ 1.3
ATP6V1AP38606 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
ATP6V1AP38606 INIP-202ENST00000374236 874 ntTSL 2 BASIC23.2■■□□□ 1.3
ATP6V1AP38606 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP6V1AP38606 YBX2P1-201ENST00000394192 760 ntBASIC23.2■■□□□ 1.3
ATP6V1AP38606 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC23.2■■□□□ 1.3
ATP6V1AP38606 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC23.2■■□□□ 1.3
ATP6V1AP38606 AC112482.1-201ENST00000492080 688 ntBASIC23.2■■□□□ 1.3
ATP6V1AP38606 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC23.2■■□□□ 1.3
ATP6V1AP38606 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC23.2■■□□□ 1.3
ATP6V1AP38606 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC23.2■■□□□ 1.3
ATP6V1AP38606 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.2■■□□□ 1.3
ATP6V1AP38606 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC23.2■■□□□ 1.3
ATP6V1AP38606 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP6V1AP38606 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC23.2■■□□□ 1.3
ATP6V1AP38606 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6V1AP38606 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6V1AP38606 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.19■■□□□ 1.3
ATP6V1AP38606 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6V1AP38606 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC23.19■■□□□ 1.3
ATP6V1AP38606 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6V1AP38606 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6V1AP38606 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6V1AP38606 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6V1AP38606 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6V1AP38606 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC23.19■■□□□ 1.3
ATP6V1AP38606 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6V1AP38606 RPS8P6-201ENST00000426177 609 ntBASIC23.19■■□□□ 1.3
ATP6V1AP38606 FIS1-203ENST00000442303 631 ntTSL 3 BASIC23.19■■□□□ 1.3
ATP6V1AP38606 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
ATP6V1AP38606 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC23.19■■□□□ 1.3
ATP6V1AP38606 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC23.19■■□□□ 1.3
ATP6V1AP38606 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC23.19■■□□□ 1.3
ATP6V1AP38606 MTDHP4-201ENST00000600287 670 ntBASIC23.19■■□□□ 1.3
ATP6V1AP38606 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC23.19■■□□□ 1.3
ATP6V1AP38606 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC23.19■■□□□ 1.3
ATP6V1AP38606 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC23.19■■□□□ 1.3
ATP6V1AP38606 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6V1AP38606 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6V1AP38606 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC23.19■■□□□ 1.3
ATP6V1AP38606 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC23.18■■□□□ 1.3
ATP6V1AP38606 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
ATP6V1AP38606 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ATP6V1AP38606 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP6V1AP38606 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP6V1AP38606 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP6V1AP38606 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ATP6V1AP38606 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.18■■□□□ 1.3
ATP6V1AP38606 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC23.18■■□□□ 1.3
ATP6V1AP38606 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ATP6V1AP38606 HMGN1P19-201ENST00000436976 333 ntBASIC23.18■■□□□ 1.3
ATP6V1AP38606 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC23.18■■□□□ 1.3
ATP6V1AP38606 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC23.18■■□□□ 1.3
ATP6V1AP38606 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC23.18■■□□□ 1.3
ATP6V1AP38606 UNC93B6-202ENST00000528242 690 ntBASIC23.18■■□□□ 1.3
ATP6V1AP38606 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC23.18■■□□□ 1.3
ATP6V1AP38606 AC105339.3-201ENST00000560043 636 ntBASIC23.18■■□□□ 1.3
ATP6V1AP38606 AP001160.2-201ENST00000596071 487 ntBASIC23.18■■□□□ 1.3
ATP6V1AP38606 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC23.18■■□□□ 1.3
ATP6V1AP38606 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
ATP6V1AP38606 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC23.18■■□□□ 1.3
ATP6V1AP38606 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC23.18■■□□□ 1.3
ATP6V1AP38606 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6V1AP38606 AP002414.3-201ENST00000589352 1468 ntBASIC23.17■■□□□ 1.3
ATP6V1AP38606 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6V1AP38606 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC23.17■■□□□ 1.3
ATP6V1AP38606 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6V1AP38606 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6V1AP38606 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6V1AP38606 SOD2-201ENST00000337404 991 ntTSL 2 BASIC23.17■■□□□ 1.3
ATP6V1AP38606 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC23.17■■□□□ 1.3
ATP6V1AP38606 KRT18P65-201ENST00000439811 1286 ntBASIC23.17■■□□□ 1.3
ATP6V1AP38606 DHDH-204ENST00000523250 634 ntTSL 5 BASIC23.17■■□□□ 1.3
ATP6V1AP38606 AC040169.1-201ENST00000565382 521 ntBASIC23.17■■□□□ 1.3
ATP6V1AP38606 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC23.17■■□□□ 1.3
ATP6V1AP38606 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6V1AP38606 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC23.17■■□□□ 1.3
ATP6V1AP38606 AC107918.4-202ENST00000641623 219 ntBASIC23.17■■□□□ 1.3
ATP6V1AP38606 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6V1AP38606 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6V1AP38606 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC23.17■■□□□ 1.3
ATP6V1AP38606 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6V1AP38606 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6V1AP38606 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
ATP6V1AP38606 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC23.17■■□□□ 1.3
ATP6V1AP38606 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V1AP38606 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC23.16■■□□□ 1.3
ATP6V1AP38606 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V1AP38606 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
ATP6V1AP38606 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V1AP38606 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V1AP38606 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC23.16■■□□□ 1.3
ATP6V1AP38606 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC23.16■■□□□ 1.3
ATP6V1AP38606 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V1AP38606 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms