Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.95■□□□□ 0.46
VARSP26640 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VARSP26640 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VARSP26640 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
VARSP26640 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.95■□□□□ 0.46
VARSP26640 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
VARSP26640 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
VARSP26640 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.95■□□□□ 0.46
VARSP26640 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VARSP26640 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
VARSP26640 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VARSP26640 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.95■□□□□ 0.46
VARSP26640 MIR3180-5-201ENST00000583743 153 ntBASIC17.95■□□□□ 0.46
VARSP26640 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.95■□□□□ 0.46
VARSP26640 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
VARSP26640 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
VARSP26640 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
VARSP26640 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VARSP26640 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.95■□□□□ 0.46
VARSP26640 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.95■□□□□ 0.46
VARSP26640 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VARSP26640 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
VARSP26640 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VARSP26640 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VARSP26640 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.95■□□□□ 0.46
VARSP26640 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
VARSP26640 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
VARSP26640 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VARSP26640 AC067852.2-201ENST00000590513 2313 ntBASIC17.94■□□□□ 0.46
VARSP26640 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VARSP26640 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.94■□□□□ 0.46
VARSP26640 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VARSP26640 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
VARSP26640 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.94■□□□□ 0.46
VARSP26640 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
VARSP26640 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VARSP26640 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VARSP26640 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
VARSP26640 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.94■□□□□ 0.46
VARSP26640 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VARSP26640 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.94■□□□□ 0.46
VARSP26640 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.94■□□□□ 0.46
VARSP26640 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.94■□□□□ 0.46
VARSP26640 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
VARSP26640 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
VARSP26640 CR769767.2-201ENST00000622735 460 ntBASIC17.94■□□□□ 0.46
VARSP26640 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
VARSP26640 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VARSP26640 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
VARSP26640 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
VARSP26640 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
VARSP26640 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VARSP26640 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
VARSP26640 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VARSP26640 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VARSP26640 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.93■□□□□ 0.46
VARSP26640 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.93■□□□□ 0.46
VARSP26640 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.93■□□□□ 0.46
VARSP26640 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.93■□□□□ 0.46
VARSP26640 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.93■□□□□ 0.46
VARSP26640 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.93■□□□□ 0.46
VARSP26640 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VARSP26640 PRORSD1P-202ENST00000563365 2154 ntBASIC17.93■□□□□ 0.46
VARSP26640 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VARSP26640 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.93■□□□□ 0.46
VARSP26640 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VARSP26640 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VARSP26640 KRT8P45-201ENST00000414328 1447 ntBASIC17.93■□□□□ 0.46
VARSP26640 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VARSP26640 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VARSP26640 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VARSP26640 ECEL1P2-202ENST00000465689 757 ntBASIC17.93■□□□□ 0.46
VARSP26640 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.93■□□□□ 0.46
VARSP26640 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VARSP26640 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.93■□□□□ 0.46
VARSP26640 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VARSP26640 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VARSP26640 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VARSP26640 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VARSP26640 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VARSP26640 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VARSP26640 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VARSP26640 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VARSP26640 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VARSP26640 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VARSP26640 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VARSP26640 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VARSP26640 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.92■□□□□ 0.46
VARSP26640 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.92■□□□□ 0.46
VARSP26640 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
VARSP26640 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.92■□□□□ 0.46
VARSP26640 AC112777.1-201ENST00000540175 1423 ntBASIC17.92■□□□□ 0.46
VARSP26640 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VARSP26640 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VARSP26640 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VARSP26640 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.92■□□□□ 0.46
VARSP26640 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VARSP26640 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VARSP26640 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
VARSP26640 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms