Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BCKDHAP12694 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
BCKDHAP12694 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BCKDHAP12694 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.46■□□□□ 0.39
BCKDHAP12694 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
BCKDHAP12694 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
BCKDHAP12694 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BCKDHAP12694 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BCKDHAP12694 AC007663.1-201ENST00000438948 1240 ntBASIC17.46■□□□□ 0.39
BCKDHAP12694 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.46■□□□□ 0.39
BCKDHAP12694 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.46■□□□□ 0.39
BCKDHAP12694 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
BCKDHAP12694 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BCKDHAP12694 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.46■□□□□ 0.39
BCKDHAP12694 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BCKDHAP12694 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.46■□□□□ 0.39
BCKDHAP12694 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BCKDHAP12694 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BCKDHAP12694 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BCKDHAP12694 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BCKDHAP12694 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.46■□□□□ 0.39
BCKDHAP12694 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.46■□□□□ 0.39
BCKDHAP12694 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BCKDHAP12694 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BCKDHAP12694 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.46■□□□□ 0.39
BCKDHAP12694 LTB4R2-202ENST00000528054 3092 ntBASIC17.46■□□□□ 0.38
BCKDHAP12694 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
BCKDHAP12694 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BCKDHAP12694 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
BCKDHAP12694 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.45■□□□□ 0.38
BCKDHAP12694 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BCKDHAP12694 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
BCKDHAP12694 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BCKDHAP12694 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
BCKDHAP12694 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.45■□□□□ 0.38
BCKDHAP12694 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.45■□□□□ 0.38
BCKDHAP12694 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BCKDHAP12694 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.45■□□□□ 0.38
BCKDHAP12694 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BCKDHAP12694 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.45■□□□□ 0.38
BCKDHAP12694 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BCKDHAP12694 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
BCKDHAP12694 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BCKDHAP12694 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BCKDHAP12694 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.45■□□□□ 0.38
BCKDHAP12694 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.45■□□□□ 0.38
BCKDHAP12694 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.45■□□□□ 0.38
BCKDHAP12694 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.45■□□□□ 0.38
BCKDHAP12694 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.45■□□□□ 0.38
BCKDHAP12694 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.45■□□□□ 0.38
BCKDHAP12694 AC116562.4-202ENST00000641738 218 ntBASIC17.45■□□□□ 0.38
BCKDHAP12694 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.45■□□□□ 0.38
BCKDHAP12694 AC093010.1-201ENST00000473625 1624 ntBASIC17.45■□□□□ 0.38
BCKDHAP12694 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BCKDHAP12694 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
BCKDHAP12694 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.45■□□□□ 0.38
BCKDHAP12694 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BCKDHAP12694 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BCKDHAP12694 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BCKDHAP12694 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
BCKDHAP12694 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BCKDHAP12694 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BCKDHAP12694 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BCKDHAP12694 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BCKDHAP12694 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
BCKDHAP12694 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BCKDHAP12694 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BCKDHAP12694 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.44■□□□□ 0.38
BCKDHAP12694 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
BCKDHAP12694 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
BCKDHAP12694 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BCKDHAP12694 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BCKDHAP12694 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.44■□□□□ 0.38
BCKDHAP12694 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
BCKDHAP12694 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BCKDHAP12694 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
BCKDHAP12694 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BCKDHAP12694 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BCKDHAP12694 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BCKDHAP12694 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.44■□□□□ 0.38
BCKDHAP12694 MIR1238-201ENST00000408483 83 ntBASIC17.44■□□□□ 0.38
BCKDHAP12694 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.44■□□□□ 0.38
BCKDHAP12694 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.44■□□□□ 0.38
BCKDHAP12694 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BCKDHAP12694 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.44■□□□□ 0.38
BCKDHAP12694 AC104390.1-201ENST00000555663 520 ntBASIC17.44■□□□□ 0.38
BCKDHAP12694 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
BCKDHAP12694 AC112497.1-201ENST00000624824 639 ntBASIC17.44■□□□□ 0.38
BCKDHAP12694 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
BCKDHAP12694 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.44■□□□□ 0.38
BCKDHAP12694 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
BCKDHAP12694 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BCKDHAP12694 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
BCKDHAP12694 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BCKDHAP12694 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BCKDHAP12694 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BCKDHAP12694 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
BCKDHAP12694 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.43■□□□□ 0.38
BCKDHAP12694 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
BCKDHAP12694 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms