Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.98■□□□□ 0.47
CAPN1P07384 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CAPN1P07384 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CAPN1P07384 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CAPN1P07384 NOC2LP2-201ENST00000407594 1944 ntBASIC17.98■□□□□ 0.47
CAPN1P07384 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CAPN1P07384 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.98■□□□□ 0.47
CAPN1P07384 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CAPN1P07384 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
CAPN1P07384 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CAPN1P07384 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.98■□□□□ 0.47
CAPN1P07384 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CAPN1P07384 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
CAPN1P07384 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CAPN1P07384 TSPY5P-201ENST00000426936 936 ntBASIC17.98■□□□□ 0.47
CAPN1P07384 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CAPN1P07384 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.98■□□□□ 0.47
CAPN1P07384 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.98■□□□□ 0.47
CAPN1P07384 AC011558.1-201ENST00000623459 338 ntBASIC17.98■□□□□ 0.47
CAPN1P07384 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CAPN1P07384 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.98■□□□□ 0.47
CAPN1P07384 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CAPN1P07384 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CAPN1P07384 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.98■□□□□ 0.47
CAPN1P07384 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
CAPN1P07384 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CAPN1P07384 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CAPN1P07384 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.98■□□□□ 0.47
CAPN1P07384 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CAPN1P07384 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CAPN1P07384 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CAPN1P07384 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CAPN1P07384 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CAPN1P07384 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CAPN1P07384 GPAT2P1-201ENST00000444924 1672 ntBASIC17.97■□□□□ 0.47
CAPN1P07384 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.97■□□□□ 0.47
CAPN1P07384 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CAPN1P07384 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.97■□□□□ 0.47
CAPN1P07384 AL023284.2-201ENST00000405850 579 ntBASIC17.97■□□□□ 0.47
CAPN1P07384 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.97■□□□□ 0.47
CAPN1P07384 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.97■□□□□ 0.47
CAPN1P07384 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.97■□□□□ 0.47
CAPN1P07384 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CAPN1P07384 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CAPN1P07384 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CAPN1P07384 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CAPN1P07384 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CAPN1P07384 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.97■□□□□ 0.47
CAPN1P07384 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.96■□□□□ 0.47
CAPN1P07384 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.96■□□□□ 0.47
CAPN1P07384 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.96■□□□□ 0.47
CAPN1P07384 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.96■□□□□ 0.47
CAPN1P07384 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CAPN1P07384 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.96■□□□□ 0.47
CAPN1P07384 AC068880.1-201ENST00000507289 2297 ntBASIC17.96■□□□□ 0.47
CAPN1P07384 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CAPN1P07384 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CAPN1P07384 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CAPN1P07384 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CAPN1P07384 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CAPN1P07384 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.96■□□□□ 0.47
CAPN1P07384 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CAPN1P07384 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.96■□□□□ 0.47
CAPN1P07384 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.96■□□□□ 0.47
CAPN1P07384 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.96■□□□□ 0.47
CAPN1P07384 KRT18P41-201ENST00000518924 1277 ntBASIC17.96■□□□□ 0.47
CAPN1P07384 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CAPN1P07384 AL512604.3-201ENST00000569583 964 ntBASIC17.96■□□□□ 0.47
CAPN1P07384 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CAPN1P07384 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.96■□□□□ 0.47
CAPN1P07384 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CAPN1P07384 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CAPN1P07384 BCL2-203ENST00000589955 5011 ntBASIC17.96■□□□□ 0.47
CAPN1P07384 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CAPN1P07384 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CAPN1P07384 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CAPN1P07384 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CAPN1P07384 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.96■□□□□ 0.47
CAPN1P07384 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CAPN1P07384 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CAPN1P07384 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CAPN1P07384 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
CAPN1P07384 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CAPN1P07384 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
CAPN1P07384 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CAPN1P07384 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.95■□□□□ 0.46
CAPN1P07384 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN1P07384 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CAPN1P07384 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.95■□□□□ 0.46
CAPN1P07384 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CAPN1P07384 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN1P07384 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN1P07384 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.95■□□□□ 0.46
CAPN1P07384 MIR564-202ENST00000385049 94 ntBASIC17.95■□□□□ 0.46
CAPN1P07384 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN1P07384 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.95■□□□□ 0.46
CAPN1P07384 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.95■□□□□ 0.46
CAPN1P07384 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.95■□□□□ 0.46
CAPN1P07384 MCCD1P1-208ENST00000445732 328 ntBASIC17.95■□□□□ 0.46
CAPN1P07384 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms