Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TPM3P06753 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TPM3P06753 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.49■□□□□ 0.87
TPM3P06753 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TPM3P06753 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TPM3P06753 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TPM3P06753 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.49■□□□□ 0.87
TPM3P06753 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TPM3P06753 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.49■□□□□ 0.87
TPM3P06753 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TPM3P06753 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.49■□□□□ 0.87
TPM3P06753 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TPM3P06753 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TPM3P06753 Z85996.1-201ENST00000494644 937 ntBASIC20.49■□□□□ 0.87
TPM3P06753 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.49■□□□□ 0.87
TPM3P06753 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TPM3P06753 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TPM3P06753 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TPM3P06753 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TPM3P06753 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TPM3P06753 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.49■□□□□ 0.87
TPM3P06753 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TPM3P06753 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TPM3P06753 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TPM3P06753 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TPM3P06753 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TPM3P06753 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TPM3P06753 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TPM3P06753 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.48■□□□□ 0.87
TPM3P06753 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.48■□□□□ 0.87
TPM3P06753 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.48■□□□□ 0.87
TPM3P06753 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TPM3P06753 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.48■□□□□ 0.87
TPM3P06753 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.48■□□□□ 0.87
TPM3P06753 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TPM3P06753 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TPM3P06753 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TPM3P06753 KRT8P11-201ENST00000409686 1436 ntBASIC20.48■□□□□ 0.87
TPM3P06753 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TPM3P06753 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TPM3P06753 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TPM3P06753 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.48■□□□□ 0.87
TPM3P06753 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
TPM3P06753 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.48■□□□□ 0.87
TPM3P06753 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.48■□□□□ 0.87
TPM3P06753 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TPM3P06753 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
TPM3P06753 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.48■□□□□ 0.87
TPM3P06753 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.48■□□□□ 0.87
TPM3P06753 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.48■□□□□ 0.87
TPM3P06753 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TPM3P06753 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC20.48■□□□□ 0.87
TPM3P06753 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TPM3P06753 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TPM3P06753 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.48■□□□□ 0.87
TPM3P06753 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.48■□□□□ 0.87
TPM3P06753 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TPM3P06753 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TPM3P06753 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TPM3P06753 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TPM3P06753 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TPM3P06753 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.48■□□□□ 0.87
TPM3P06753 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
TPM3P06753 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TPM3P06753 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TPM3P06753 NKILA-202ENST00000614771 2598 ntBASIC20.47■□□□□ 0.87
TPM3P06753 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.47■□□□□ 0.87
TPM3P06753 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TPM3P06753 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC20.47■□□□□ 0.87
TPM3P06753 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC20.47■□□□□ 0.87
TPM3P06753 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.47■□□□□ 0.87
TPM3P06753 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TPM3P06753 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.47■□□□□ 0.87
TPM3P06753 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TPM3P06753 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.47■□□□□ 0.87
TPM3P06753 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.47■□□□□ 0.87
TPM3P06753 AC133041.1-202ENST00000642053 222 ntBASIC20.47■□□□□ 0.87
TPM3P06753 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TPM3P06753 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TPM3P06753 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TPM3P06753 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TPM3P06753 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TPM3P06753 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TPM3P06753 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.46■□□□□ 0.87
TPM3P06753 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TPM3P06753 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.46■□□□□ 0.87
TPM3P06753 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TPM3P06753 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
TPM3P06753 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TPM3P06753 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
TPM3P06753 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TPM3P06753 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.46■□□□□ 0.87
TPM3P06753 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.46■□□□□ 0.87
TPM3P06753 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TPM3P06753 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.46■□□□□ 0.87
TPM3P06753 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TPM3P06753 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TPM3P06753 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TPM3P06753 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TPM3P06753 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms