Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL5A2P05997 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL5A2P05997 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
COL5A2P05997 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
COL5A2P05997 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL5A2P05997 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC23.92■■□□□ 1.42
COL5A2P05997 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
COL5A2P05997 KRT18P2-201ENST00000447938 1258 ntBASIC23.92■■□□□ 1.42
COL5A2P05997 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
COL5A2P05997 COX5A-206ENST00000568783 571 ntTSL 3 BASIC23.92■■□□□ 1.42
COL5A2P05997 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC23.92■■□□□ 1.42
COL5A2P05997 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC23.92■■□□□ 1.42
COL5A2P05997 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC23.92■■□□□ 1.42
COL5A2P05997 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC23.92■■□□□ 1.42
COL5A2P05997 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC23.92■■□□□ 1.42
COL5A2P05997 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC23.92■■□□□ 1.42
COL5A2P05997 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
COL5A2P05997 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL5A2P05997 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.91■■□□□ 1.42
COL5A2P05997 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL5A2P05997 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
COL5A2P05997 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC23.91■■□□□ 1.42
COL5A2P05997 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC23.91■■□□□ 1.42
COL5A2P05997 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL5A2P05997 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC23.91■■□□□ 1.42
COL5A2P05997 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC23.91■■□□□ 1.42
COL5A2P05997 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC23.91■■□□□ 1.42
COL5A2P05997 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC23.91■■□□□ 1.42
COL5A2P05997 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC23.91■■□□□ 1.42
COL5A2P05997 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL5A2P05997 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
COL5A2P05997 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
COL5A2P05997 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
COL5A2P05997 SIGLEC16-201ENST00000599858 1437 ntBASIC23.91■■□□□ 1.42
COL5A2P05997 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
COL5A2P05997 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
COL5A2P05997 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
COL5A2P05997 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL5A2P05997 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
COL5A2P05997 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC23.9■■□□□ 1.42
COL5A2P05997 AC002310.6-201ENST00000624451 1377 ntBASIC23.9■■□□□ 1.42
COL5A2P05997 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL5A2P05997 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC23.9■■□□□ 1.42
COL5A2P05997 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC23.9■■□□□ 1.42
COL5A2P05997 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
COL5A2P05997 CD9-202ENST00000382515 1229 ntTSL 5 BASIC23.9■■□□□ 1.42
COL5A2P05997 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
COL5A2P05997 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC23.9■■□□□ 1.42
COL5A2P05997 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL5A2P05997 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL5A2P05997 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
COL5A2P05997 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
COL5A2P05997 KRT18P28-201ENST00000453838 1332 ntBASIC23.9■■□□□ 1.42
COL5A2P05997 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC23.9■■□□□ 1.42
COL5A2P05997 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC23.9■■□□□ 1.42
COL5A2P05997 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.9■■□□□ 1.42
COL5A2P05997 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
COL5A2P05997 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
COL5A2P05997 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC23.89■■□□□ 1.42
COL5A2P05997 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
COL5A2P05997 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC23.89■■□□□ 1.42
COL5A2P05997 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
COL5A2P05997 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
COL5A2P05997 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
COL5A2P05997 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC23.89■■□□□ 1.42
COL5A2P05997 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC23.89■■□□□ 1.42
COL5A2P05997 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
COL5A2P05997 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC23.89■■□□□ 1.42
COL5A2P05997 AC136632.2-201ENST00000512891 861 ntBASIC23.89■■□□□ 1.42
COL5A2P05997 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
COL5A2P05997 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC23.89■■□□□ 1.42
COL5A2P05997 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.89■■□□□ 1.42
COL5A2P05997 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
COL5A2P05997 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC23.89■■□□□ 1.41
COL5A2P05997 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC23.89■■□□□ 1.41
COL5A2P05997 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL5A2P05997 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL5A2P05997 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC23.89■■□□□ 1.41
COL5A2P05997 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.88■■□□□ 1.41
COL5A2P05997 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC23.88■■□□□ 1.41
COL5A2P05997 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC23.88■■□□□ 1.41
COL5A2P05997 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC23.88■■□□□ 1.41
COL5A2P05997 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
COL5A2P05997 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC23.88■■□□□ 1.41
COL5A2P05997 AL596442.2-201ENST00000610240 980 ntBASIC23.88■■□□□ 1.41
COL5A2P05997 PGM5P2-202ENST00000637225 1043 ntBASIC23.88■■□□□ 1.41
COL5A2P05997 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
COL5A2P05997 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL5A2P05997 AC093484.2-201ENST00000580996 2166 ntBASIC23.88■■□□□ 1.41
COL5A2P05997 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
COL5A2P05997 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL5A2P05997 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC23.88■■□□□ 1.41
COL5A2P05997 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
COL5A2P05997 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL5A2P05997 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC23.88■■□□□ 1.41
COL5A2P05997 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC23.88■■□□□ 1.41
COL5A2P05997 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC23.88■■□□□ 1.41
COL5A2P05997 ELK2BP-201ENST00000415014 1224 ntBASIC23.87■■□□□ 1.41
COL5A2P05997 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
COL5A2P05997 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms