Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHGBP05060 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CHGBP05060 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.91■■□□□ 1.1
CHGBP05060 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.91■■□□□ 1.1
CHGBP05060 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHGBP05060 AL353692.3-201ENST00000407031 1396 ntBASIC21.91■■□□□ 1.1
CHGBP05060 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHGBP05060 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.91■■□□□ 1.1
CHGBP05060 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHGBP05060 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHGBP05060 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.91■■□□□ 1.1
CHGBP05060 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CHGBP05060 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CHGBP05060 AC092119.3-201ENST00000612618 583 ntBASIC21.91■■□□□ 1.1
CHGBP05060 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CHGBP05060 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.91■■□□□ 1.1
CHGBP05060 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CHGBP05060 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CHGBP05060 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHGBP05060 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHGBP05060 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHGBP05060 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CHGBP05060 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.9■■□□□ 1.1
CHGBP05060 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHGBP05060 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CHGBP05060 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHGBP05060 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHGBP05060 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHGBP05060 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.9■■□□□ 1.1
CHGBP05060 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.9■■□□□ 1.1
CHGBP05060 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHGBP05060 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHGBP05060 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.9■■□□□ 1.1
CHGBP05060 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CHGBP05060 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.9■■□□□ 1.1
CHGBP05060 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.9■■□□□ 1.1
CHGBP05060 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.9■■□□□ 1.1
CHGBP05060 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHGBP05060 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHGBP05060 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHGBP05060 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.9■■□□□ 1.1
CHGBP05060 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
CHGBP05060 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CHGBP05060 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CHGBP05060 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
CHGBP05060 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHGBP05060 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHGBP05060 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CHGBP05060 TSSC2-201ENST00000450217 709 ntBASIC21.89■■□□□ 1.09
CHGBP05060 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.89■■□□□ 1.09
CHGBP05060 KRT8P26-201ENST00000534154 1276 ntBASIC21.89■■□□□ 1.09
CHGBP05060 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.89■■□□□ 1.09
CHGBP05060 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.89■■□□□ 1.09
CHGBP05060 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.89■■□□□ 1.09
CHGBP05060 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CHGBP05060 AC069148.1-201ENST00000608741 768 ntBASIC21.89■■□□□ 1.09
CHGBP05060 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CHGBP05060 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.89■■□□□ 1.09
CHGBP05060 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHGBP05060 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CHGBP05060 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHGBP05060 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHGBP05060 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.89■■□□□ 1.09
CHGBP05060 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.89■■□□□ 1.09
CHGBP05060 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHGBP05060 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CHGBP05060 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHGBP05060 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CHGBP05060 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHGBP05060 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.88■■□□□ 1.09
CHGBP05060 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.88■■□□□ 1.09
CHGBP05060 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.88■■□□□ 1.09
CHGBP05060 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHGBP05060 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHGBP05060 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHGBP05060 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHGBP05060 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.88■■□□□ 1.09
CHGBP05060 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.88■■□□□ 1.09
CHGBP05060 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.88■■□□□ 1.09
CHGBP05060 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.88■■□□□ 1.09
CHGBP05060 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.88■■□□□ 1.09
CHGBP05060 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.88■■□□□ 1.09
CHGBP05060 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHGBP05060 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHGBP05060 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHGBP05060 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHGBP05060 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHGBP05060 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.88■■□□□ 1.09
CHGBP05060 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.88■■□□□ 1.09
CHGBP05060 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.88■■□□□ 1.09
CHGBP05060 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC21.88■■□□□ 1.09
CHGBP05060 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHGBP05060 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
CHGBP05060 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHGBP05060 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.87■■□□□ 1.09
CHGBP05060 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CHGBP05060 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHGBP05060 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.87■■□□□ 1.09
CHGBP05060 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHGBP05060 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms