Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC13.92□□□□□ -0.18
TCRAP04437 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC13.92□□□□□ -0.18
TCRAP04437 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC13.92□□□□□ -0.18
TCRAP04437 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC13.92□□□□□ -0.18
TCRAP04437 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TCRAP04437 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TCRAP04437 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TCRAP04437 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
TCRAP04437 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
TCRAP04437 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
TCRAP04437 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRAP04437 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TCRAP04437 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRAP04437 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRAP04437 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRAP04437 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TCRAP04437 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13.91□□□□□ -0.18
TCRAP04437 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC13.91□□□□□ -0.18
TCRAP04437 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRAP04437 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC13.91□□□□□ -0.18
TCRAP04437 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.91□□□□□ -0.18
TCRAP04437 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC13.91□□□□□ -0.18
TCRAP04437 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRAP04437 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRAP04437 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC13.91□□□□□ -0.18
TCRAP04437 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
TCRAP04437 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TCRAP04437 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13.91□□□□□ -0.18
TCRAP04437 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TCRAP04437 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC13.91□□□□□ -0.18
TCRAP04437 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC13.91□□□□□ -0.18
TCRAP04437 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TCRAP04437 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC13.91□□□□□ -0.18
TCRAP04437 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TCRAP04437 KRT16P5-201ENST00000455284 522 ntBASIC13.91□□□□□ -0.18
TCRAP04437 AC091390.4-202ENST00000476426 537 ntBASIC13.91□□□□□ -0.18
TCRAP04437 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
TCRAP04437 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC13.91□□□□□ -0.18
TCRAP04437 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC13.91□□□□□ -0.18
TCRAP04437 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC13.91□□□□□ -0.18
TCRAP04437 MTDHP1-201ENST00000605323 784 ntBASIC13.91□□□□□ -0.18
TCRAP04437 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC13.91□□□□□ -0.18
TCRAP04437 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TCRAP04437 AC133041.1-202ENST00000642053 222 ntBASIC13.91□□□□□ -0.18
TCRAP04437 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRAP04437 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRAP04437 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.91□□□□□ -0.18
TCRAP04437 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRAP04437 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRAP04437 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
TCRAP04437 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
TCRAP04437 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRAP04437 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TCRAP04437 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRAP04437 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TCRAP04437 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRAP04437 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TCRAP04437 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TCRAP04437 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRAP04437 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TCRAP04437 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TCRAP04437 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TCRAP04437 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC13.9□□□□□ -0.18
TCRAP04437 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TCRAP04437 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.9□□□□□ -0.18
TCRAP04437 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRAP04437 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TCRAP04437 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRAP04437 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRAP04437 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRAP04437 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRAP04437 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC13.9□□□□□ -0.18
TCRAP04437 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TCRAP04437 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC13.9□□□□□ -0.18
TCRAP04437 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC13.9□□□□□ -0.18
TCRAP04437 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC13.9□□□□□ -0.18
TCRAP04437 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC13.9□□□□□ -0.18
TCRAP04437 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC13.9□□□□□ -0.18
TCRAP04437 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRAP04437 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRAP04437 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TCRAP04437 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TCRAP04437 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRAP04437 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TCRAP04437 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC13.9□□□□□ -0.18
TCRAP04437 AL023806.1-201ENST00000603994 1649 ntBASIC13.9□□□□□ -0.19
TCRAP04437 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
TCRAP04437 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TCRAP04437 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC13.89□□□□□ -0.19
TCRAP04437 AD000864.1-201ENST00000624076 2295 ntBASIC13.89□□□□□ -0.19
TCRAP04437 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRAP04437 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TCRAP04437 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRAP04437 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TCRAP04437 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRAP04437 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TCRAP04437 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRAP04437 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC13.89□□□□□ -0.19
TCRAP04437 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC13.89□□□□□ -0.19
TCRAP04437 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms