Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL1A1P02452 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.89■■□□□ 1.09
COL1A1P02452 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC21.89■■□□□ 1.09
COL1A1P02452 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC21.89■■□□□ 1.09
COL1A1P02452 MIR7706-201ENST00000613747 67 ntBASIC21.89■■□□□ 1.09
COL1A1P02452 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.89■■□□□ 1.09
COL1A1P02452 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.89■■□□□ 1.09
COL1A1P02452 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL1A1P02452 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC21.88■■□□□ 1.09
COL1A1P02452 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL1A1P02452 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL1A1P02452 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL1A1P02452 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL1A1P02452 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL1A1P02452 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
COL1A1P02452 AC125634.1-201ENST00000438758 1403 ntBASIC21.88■■□□□ 1.09
COL1A1P02452 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL1A1P02452 RCN1P2-201ENST00000398357 915 ntBASIC21.88■■□□□ 1.09
COL1A1P02452 AL031284.1-201ENST00000419297 478 ntBASIC21.88■■□□□ 1.09
COL1A1P02452 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC21.88■■□□□ 1.09
COL1A1P02452 AF186996.4-201ENST00000467186 377 ntBASIC21.88■■□□□ 1.09
COL1A1P02452 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21.88■■□□□ 1.09
COL1A1P02452 KRT18P58-201ENST00000527480 1120 ntBASIC21.88■■□□□ 1.09
COL1A1P02452 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC21.88■■□□□ 1.09
COL1A1P02452 TP73-AS1-210ENST00000637775 1455 ntBASIC21.88■■□□□ 1.09
COL1A1P02452 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.88■■□□□ 1.09
COL1A1P02452 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.88■■□□□ 1.09
COL1A1P02452 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.88■■□□□ 1.09
COL1A1P02452 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL1A1P02452 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
COL1A1P02452 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL1A1P02452 AC073592.3-201ENST00000625118 1834 ntBASIC21.87■■□□□ 1.09
COL1A1P02452 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.87■■□□□ 1.09
COL1A1P02452 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL1A1P02452 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL1A1P02452 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL1A1P02452 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL1A1P02452 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.87■■□□□ 1.09
COL1A1P02452 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL1A1P02452 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL1A1P02452 FAM197Y8-203ENST00000450145 560 ntBASIC21.87■■□□□ 1.09
COL1A1P02452 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
COL1A1P02452 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL1A1P02452 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.87■■□□□ 1.09
COL1A1P02452 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.87■■□□□ 1.09
COL1A1P02452 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.87■■□□□ 1.09
COL1A1P02452 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC21.87■■□□□ 1.09
COL1A1P02452 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL1A1P02452 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL1A1P02452 GMCL1P1-201ENST00000463439 1581 ntBASIC21.87■■□□□ 1.09
COL1A1P02452 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL1A1P02452 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL1A1P02452 AC093010.1-201ENST00000473625 1624 ntBASIC21.87■■□□□ 1.09
COL1A1P02452 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.87■■□□□ 1.09
COL1A1P02452 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC21.86■■□□□ 1.09
COL1A1P02452 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.86■■□□□ 1.09
COL1A1P02452 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
COL1A1P02452 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL1A1P02452 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL1A1P02452 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL1A1P02452 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL1A1P02452 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL1A1P02452 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL1A1P02452 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL1A1P02452 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
COL1A1P02452 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL1A1P02452 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL1A1P02452 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL1A1P02452 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL1A1P02452 AC008608.2-201ENST00000606089 416 ntBASIC21.86■■□□□ 1.09
COL1A1P02452 AP001269.4-201ENST00000609611 512 ntBASIC21.86■■□□□ 1.09
COL1A1P02452 ABBA01031661.1-201ENST00000634362 1253 ntBASIC21.86■■□□□ 1.09
COL1A1P02452 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL1A1P02452 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.86■■□□□ 1.09
COL1A1P02452 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL1A1P02452 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL1A1P02452 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL1A1P02452 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL1A1P02452 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL1A1P02452 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL1A1P02452 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL1A1P02452 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
COL1A1P02452 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL1A1P02452 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC21.85■■□□□ 1.09
COL1A1P02452 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC21.85■■□□□ 1.09
COL1A1P02452 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.85■■□□□ 1.09
COL1A1P02452 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
COL1A1P02452 RNPS1P1-201ENST00000507437 918 ntBASIC21.85■■□□□ 1.09
COL1A1P02452 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC21.85■■□□□ 1.09
COL1A1P02452 MOK-208ENST00000519058 917 ntTSL 2 BASIC21.85■■□□□ 1.09
COL1A1P02452 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC21.85■■□□□ 1.09
COL1A1P02452 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
COL1A1P02452 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.85■■□□□ 1.09
COL1A1P02452 KRT8P47-201ENST00000604727 1398 ntBASIC21.85■■□□□ 1.09
COL1A1P02452 PHGDH-209ENST00000641074 1780 ntBASIC21.85■■□□□ 1.09
COL1A1P02452 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.85■■□□□ 1.09
COL1A1P02452 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL1A1P02452 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL1A1P02452 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL1A1P02452 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms